RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 GRM2Q14416 872 aa16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 CYTH1Q15438 398 aa16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 PAN2Q504Q3 1202 aaKnown RBP16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 ZNF789Q5FWF6 425 aa16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 TSTD2Q5T7W7 516 aa16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 IL23RQ5VWK5 629 aa16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 ESRP1Q6NXG1 681 aaKnown RBP16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 CXCL17Q6UXB2 119 aa16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 CRYBG2Q8N1P7 616 aa16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 CNTD1Q8N815 330 aa16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 WNT8BQ93098 351 aa16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 ZNF512Q96ME7 567 aaPredicted RBP16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 LIN28AQ9H9Z2 209 aaKnown RBP16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 WDR6Q9NNW5 1121 aaKnown RBP16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 EIF2B3Q9NR50 452 aaKnown RBP16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 GTSE1Q9NYZ3 720 aa16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 TLK1Q9UKI8 766 aa16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 PSMD13Q9UNM6 376 aa16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 Q9Y3F1 56 aa16.05■□□□□ 0.16
SNAPC1-201ENST00000216294 TTC24A2A3L6 582 aaPredicted RBP16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 RGSL1A5PLK6 1076 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 DFFAO00273 331 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 HDAC3O15379 428 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 PYGLP06737 847 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 PABPC4LP0CB38 370 aaKnown RBP16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 KCNA5P22460 613 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 CXCR3P49682 368 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 CRYBB1P53674 252 aaPredicted RBP16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 NME5P56597 212 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 LILRA4P59901 499 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 TRIM32Q13049 653 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 PIGGQ5H8A4 983 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 GNASQ5JWF2 1037 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 IPMKQ8NFU5 416 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 TRIB2Q92519 343 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 JADE3Q92613 823 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 DUSP16Q9BY84 665 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 CASS4Q9NQ75 786 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 RIMS3Q9UJD0 308 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 IPPQ9Y573 584 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 ATP6AP2A0A1C7CYW4 349 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 MYBPHLA2RUH7 354 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 HUS1O60921 280 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 ATP6AP2O75787 350 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 AXLP30530 894 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 NOS2P35228 1153 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 PAFAH1B3Q15102 231 aaKnown RBP16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 SH2D4BQ5SQS7 431 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 RWDD4Q6NW29 188 aaKnown RBP16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 CNSTQ6PJW8 725 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 ZC3HC1Q86WB0 502 aaKnown RBP16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 UNC93AQ86WB7 457 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 LRRC52Q8N7C0 313 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 SMG8Q8ND04 991 aaKnown RBP16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 SH3RF2Q8TEC5 729 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 TRIM8Q9BZR9 551 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 CHST12Q9NRB3 414 aa16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 UBQLN1Q9UMX0 589 aaKnown RBP16.04■□□□□ 0.16
SNAPC1-201ENST00000216294 ZNF487B1APH4 448 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 THRAP10827 490 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 NPR3P17342 541 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 HOXC8P31273 242 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 LSAMPQ13449 338 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 PCBP1Q15365 356 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 MYLK3Q32MK0 819 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 KCTD11Q693B1 232 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 TWF2Q6IBS0 349 aaKnown RBP16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 LDB1Q86U70 411 aaPredicted RBP16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 OR9I1Q8NGQ6 314 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 B4GALNT2Q8NHY0 566 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 NDFIP2Q9NV92 336 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 ABT1Q9ULW3 272 aaKnown RBP16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 SLC4A7Q9Y6M7 1214 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 CASQ2O14958 399 aaPredicted RBP16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 XPO1O14980 1071 aaKnown RBP16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 CLPTM1O96005 669 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 ATP5BP06576 529 aaKnown RBP16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 CTSHP09668 335 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 ART3Q13508 389 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 SMYD5Q6GMV2 418 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 KLHDC10Q6PID8 442 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 ZFP28Q8NHY6 868 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 TMIGD2Q96BF3 282 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 DRC3Q9H069 523 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 TKTL2Q9H0I9 626 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 OSBPL2Q9H1P3 480 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 CRTAC1Q9NQ79 661 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 GIMAP2Q9UG22 337 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 RAP2CQ9Y3L5 183 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 RALGAPA2Q2PPJ7 1873 aa16.03■□□□□ 0.16
SNAPC1-201ENST00000216294 TCAF2A6NFQ2 919 aa16.02■□□□□ 0.16
SNAPC1-201ENST00000216294 DUSP11O75319 330 aaKnown RBP16.02■□□□□ 0.16
SNAPC1-201ENST00000216294 DAB1O75553 588 aa16.02■□□□□ 0.16
SNAPC1-201ENST00000216294 RANBP1P43487 201 aa16.02■□□□□ 0.16
SNAPC1-201ENST00000216294 ADGRE1Q14246 886 aa16.02■□□□□ 0.16
SNAPC1-201ENST00000216294 LIPMQ5VYY2 423 aa16.02■□□□□ 0.16
SNAPC1-201ENST00000216294 TXNDC5Q8NBS9 432 aaKnown RBP16.02■□□□□ 0.16
SNAPC1-201ENST00000216294 HMGCLL1Q8TB92 370 aa16.02■□□□□ 0.16
SNAPC1-201ENST00000216294 EZH1Q92800 747 aaPredicted RBP16.02■□□□□ 0.16
SNAPC1-201ENST00000216294 PRICKLE1Q96MT3 831 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms