RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 TTC17Q96AE7 1141 aa19.96■□□□□ 0.79
TNFRSF1A-201ENST00000162749 FCRL3Q96P31 734 aaPredicted RBP19.96■□□□□ 0.79
TNFRSF1A-201ENST00000162749 POLR1EQ9GZS1 481 aaKnown RBP19.96■□□□□ 0.79
TNFRSF1A-201ENST00000162749 MUC3BQ9H195 1237 aa19.96■□□□□ 0.79
TNFRSF1A-201ENST00000162749 KIF9Q9HAQ2 790 aa19.96■□□□□ 0.79
TNFRSF1A-201ENST00000162749 TTC24A2A3L6 582 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 BRAFP15056 766 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 WNT3AP56704 352 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 LRRC14Q15048 493 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 PCSK7Q16549 785 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 PRSS36Q5K4E3 855 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 KDELC2Q7Z4H8 507 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 GRASPQ7Z6J2 395 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SLC26A11Q86WA9 606 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 MICALL1Q8N3F8 863 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 LEMD2Q8NC56 503 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 RIN3Q8TB24 985 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 WFDC5Q8TCV5 224 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SH3RF2Q8TEC5 729 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ZNF707Q96C28 371 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CABS1Q96KC9 395 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 PRKD2Q9BZL6 878 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 TASP1Q9H6P5 420 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 NUP210Q8TEM1 1887 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CCDC195A0A1B0GUA6 201 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CBX4O00257 560 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 GJB3O75712 270 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 RNF187Q5TA31 235 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ZNF783Q6ZMS7 281 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 TADA1Q96BN2 335 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ABHD8Q96I13 439 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SEMA3CQ99985 751 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CHRAC1Q9NRG0 131 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 UBA2Q9UBT2 640 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 DPP7Q9UHL4 492 aa19.95■□□□□ 0.78
TNFRSF1A-201ENST00000162749 FAM237BA0A1B0GVD1 139 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 A0A1W2PPM1 405 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 UGT1A9O60656 530 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 FAM155BO75949 473 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 USP1O94782 785 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 MZF1P28698 734 aaPredicted RBP19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CHRNA4P43681 627 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CDH18Q13634 790 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SPANXN3Q5MJ09 141 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ALG1LQ6GMV1 187 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 PIGWQ7Z7B1 504 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 DDI1Q8WTU0 396 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 USP13Q92995 863 aaPredicted RBP19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ZNF669Q96BR6 464 aaPredicted RBP19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 MFSD3Q96ES6 412 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 PSKH2Q96QS6 385 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 UGT1A7Q9HAW7 530 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 UGT1A10Q9HAW8 530 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 UGT1A8Q9HAW9 530 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 IL1RAPL1Q9NZN1 696 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SENP1Q9P0U3 644 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SOX13Q9UN79 622 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 UNC80Q8N2C7 3258 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ZCWPW2A0A1B0GU75 182 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 MAGEB16A2A368 324 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ARF5P84085 180 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SPRED3Q2MJR0 410 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ARHGAP15Q53QZ3 475 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 MGARPQ8TDB4 240 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 FEM1AQ9BSK4 669 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 TRABDQ9H4I3 376 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ZNF180Q9UJW8 692 aa19.94■□□□□ 0.78
TNFRSF1A-201ENST00000162749 POU6F1Q14863 301 aa19.93■□□□□ 0.78
TNFRSF1A-201ENST00000162749 POTEHQ6S545 545 aa19.93■□□□□ 0.78
TNFRSF1A-201ENST00000162749 TPGS1Q6ZTW0 290 aa19.93■□□□□ 0.78
TNFRSF1A-201ENST00000162749 PACS2Q86VP3 889 aa19.93■□□□□ 0.78
TNFRSF1A-201ENST00000162749 MFN1Q8IWA4 741 aa19.93■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CERS2Q96G23 380 aa19.93■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ZNF778Q96MU6 729 aa19.93■□□□□ 0.78
TNFRSF1A-201ENST00000162749 MGME1Q9BQP7 344 aa19.93■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ARNT2Q9HBZ2 717 aa19.93■□□□□ 0.78
TNFRSF1A-201ENST00000162749 TDP1Q9NUW8 608 aa19.93■□□□□ 0.78
TNFRSF1A-201ENST00000162749 PLK2Q9NYY3 685 aa19.93■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SEPT3Q9UH03 358 aa19.93■□□□□ 0.78
TNFRSF1A-201ENST00000162749 OR51B4Q9Y5P0 310 aa19.93■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SPTBN5Q9NRC6 3674 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 IQANK1A0A1B0GTG1 560 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 E2F8A0AVK6 867 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 FSBPO95073 299 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 PRAMEF12O95522 483 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 RFTN1Q14699 578 aaPredicted RBP19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ANKRD20A4Q4UJ75 823 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 MPP7Q5T2T1 576 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 PPP2R2DQ66LE6 453 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CCDC117Q8IWD4 279 aaPredicted RBP19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 C4orf33Q8N1A6 199 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 BBS5Q8N3I7 341 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 GDPD5Q8WTR4 605 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 KIFC1Q9BW19 673 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CINPQ9BW66 212 aaPredicted RBP19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 NKX2-4Q9H2Z4 354 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 TLE6Q9H808 572 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 KCNK9Q9NPC2 374 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SLC17A6Q9P2U8 582 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms