RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 IL22Q9GZX6 179 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 OSBPL2Q9H1P3 480 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 GBA3Q9H227 469 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 NOL11Q9H8H0 719 aaKnown RBP14.21□□□□□ -0.13
USH1C-201ENST00000005226 CHST12Q9NRB3 414 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 ACOT9Q9Y305 439 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 AP4S1Q9Y587 144 aa14.21□□□□□ -0.13
USH1C-201ENST00000005226 ADM5C9JUS6 153 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 PENKP01210 267 aaPredicted RBP14.21□□□□□ -0.14
USH1C-201ENST00000005226 CSE1LP55060 971 aaKnown RBP14.21□□□□□ -0.14
USH1C-201ENST00000005226 COG7P83436 770 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 GRIK4Q16099 956 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 KYAT1Q16773 422 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 AGKQ53H12 422 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 KIAA0319Q5VV43 1072 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 NUP93Q8N1F7 819 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 LRRC52Q8N7C0 313 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 TRIML2Q8N7C3 387 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 TSPAN14Q8NG11 270 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 SLCO4A1Q96BD0 722 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 SLC2A11Q9BYW1 496 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 MAF1Q9H063 256 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 SFMBT1Q9UHJ3 866 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 VPS28Q9UK41 221 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 DMTF1Q9Y222 760 aa14.21□□□□□ -0.14
USH1C-201ENST00000005226 TIMM13Q9Y5L4 95 aaPredicted RBP14.21□□□□□ -0.14
USH1C-201ENST00000005226 ATP6AP2A0A1C7CYW4 349 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 PRORSD1PA6NEY8 169 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 TRIM38O00635 465 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 FBP2O00757 339 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 PFDN1O60925 122 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 ATP6AP2O75787 350 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 USP17L7P0C7H9 530 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 NCAM1P13591 858 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 NME5P56597 212 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 TAS2R39P59534 338 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 PPIDQ08752 370 aaKnown RBP14.2□□□□□ -0.14
USH1C-201ENST00000005226 SLC12A1Q13621 1099 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 SMYD5Q6GMV2 418 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 MAMDC4Q6UXC1 1216 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 DEFB132Q7Z7B7 95 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 IPMKQ8NFU5 416 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 HEXDCQ8WVB3 486 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 NT5C3BQ969T7 300 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 ELMO2Q96JJ3 720 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 DUSP16Q9BY84 665 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 RHOJQ9H4E5 214 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 POMKQ9H5K3 350 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 WDR6Q9NNW5 1121 aaKnown RBP14.2□□□□□ -0.14
USH1C-201ENST00000005226 DDIT4Q9NX09 232 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 FAM95CA0A1B0GW59 222 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 ARHGEF37A1IGU5 675 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 FZD9O00144 591 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 PIRO00625 290 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 STRNO43815 780 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 H2AFYO75367 372 aaKnown RBP14.2□□□□□ -0.14
USH1C-201ENST00000005226 TRMUO75648 421 aaKnown RBP14.2□□□□□ -0.14
USH1C-201ENST00000005226 YBX3P16989 372 aaKnown RBP eCLIP14.2□□□□□ -0.14
USH1C-201ENST00000005226 CDH2P19022 906 aaPredicted RBP14.2□□□□□ -0.14
USH1C-201ENST00000005226 C1QTNF8P60827 252 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 PRAMEP78395 509 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 IKBKEQ14164 716 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 ZNF789Q5FWF6 425 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 SLC27A1Q6PCB7 646 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 TRIM67Q6ZTA4 783 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 CLEC20AQ6ZU45 233 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 CATSPER1Q8NEC5 780 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 TMEM79Q9BSE2 394 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 IL1RL2Q9HB29 575 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 SPON1Q9HCB6 807 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 TMEM30AQ9NV96 361 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 STAP1Q9ULZ2 295 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 MTF2Q9Y483 593 aaPredicted RBP14.2□□□□□ -0.14
USH1C-201ENST00000005226 CSADQ9Y600 493 aa14.2□□□□□ -0.14
USH1C-201ENST00000005226 C9JVG2 144 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 FOXD2O60548 495 aaPredicted RBP14.19□□□□□ -0.14
USH1C-201ENST00000005226 TIPRLO75663 272 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 NPY2RP49146 381 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 NR1H2P55055 460 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 TRIM25Q14258 630 aaKnown RBP14.19□□□□□ -0.14
USH1C-201ENST00000005226 CSHL1Q14406 222 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 TMEM259Q4ZIN3 620 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 NOMO2Q5JPE7 1267 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 WSCD1Q658N2 575 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 TAPT1Q6NXT6 567 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 HERC6Q8IVU3 1022 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 CHERPQ8IWX8 916 aaKnown RBP14.19□□□□□ -0.14
USH1C-201ENST00000005226 RIN3Q8TB24 985 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 SNRNP27Q8WVK2 155 aaKnown RBP14.19□□□□□ -0.14
USH1C-201ENST00000005226 PHF21BQ96EK2 531 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 ZNF419Q96HQ0 510 aaPredicted RBP14.19□□□□□ -0.14
USH1C-201ENST00000005226 RHOBTB2Q9BYZ6 727 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 FBRSL1Q9HCM7 1045 aaKnown RBP14.19□□□□□ -0.14
USH1C-201ENST00000005226 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.19□□□□□ -0.14
USH1C-201ENST00000005226 A0A0J9YVX5 310 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 ZNF839A8K0R7 811 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 TADA2AO75478 443 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 NPR3P17342 541 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 UGT1A6P19224 532 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 SCNN1AP37088 669 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms