RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Osbpl8B9EJ86 889 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm3252E9PUT9 216 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm3002E9PW72 216 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm3298E9PW80 205 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm3468E9QAJ8 216 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm3667K7N757 205 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Il1aP01582 270 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Guca1aP43081 202 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Hoxc13P50207 328 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm3558Q5FWC9 205 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Nrg1Q6DR99 700 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pth2rQ91V95 546 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Clvs1Q9D4C9 354 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 H2afb2S4R1M3 115 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Mup6A2AV72 179 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Slc27a6E9Q9W4 619 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 S100a6P14069 89 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Adra1dP97714 562 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Shcbp1lQ3TTP0 639 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 9930111J21Rik1Q5SVP0 844 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 PolbQ8K409 335 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Chchd6Q91VN4 273 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Thap11Q9JJD0 305 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Acsl4Q9QUJ7 711 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Cry2Q9R194 592 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pex10B1AUE5 324 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ifit3bE9PV48 403 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Cyp2b23E9Q593 491 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm8926L7MUE8 181 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ccr5P51682 354 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Abcg2Q7TMS5 657 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Zfp62Q8C827 914 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 SntnQ8C9X1 147 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Akr1c20Q8VC77 323 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Stx18Q8VDS8 334 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Depdc7Q91WS7 511 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pcdhb13Q91Y06 796 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Sesn3Q9CYP7 492 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Stx11Q9D3G5 287 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gria4Q9Z2W8 902 aa15.71■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Xpnpep3B7ZMP1 506 aaKnown RBP15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Kng1O08677 661 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Slc1a6O35544 561 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Serpina3cP29621 417 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 S100gP97816 79 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 DazlQ64368 298 aaKnown RBP15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Rbbp8Q80YR6 893 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ctu1Q99J10 420 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Mcrs1Q99L90 462 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 CabyrQ9D424 453 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Klhl18A0A0G2JGN5 579 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ttc7bE9Q6P5 843 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Wnt3aP27467 352 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Vps26aP40336 327 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Arhgap1Q5FWK3 439 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Magee1Q6PCZ4 918 aaKnown RBP15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Cdc14bQ6PFY9 485 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Wdr95D3Z7A8 784 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Gm3526E9PZM0 191 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Vmn1r39G3UWE6 305 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Il12bP43432 335 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Kcnj6P48542 425 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Oaz1P54369 227 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Shox2P70390 331 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Akr1c6P70694 323 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Zc3hav1Q3UPF5 946 aaKnown RBP15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Nxpe4Q52KP5 543 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 ADGRF3Q58Y75 991 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Msi1Q61474 362 aaKnown RBP15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 GatbQ99JT1 557 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Tex12Q9CR81 123 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Tsga13Q9DA17 273 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Spata31d1aE9QA35 1336 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ltbp4Q8K4G1 1666 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Olfr1123A2AT85 323 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 FanceB8JJD6 213 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Dcpp3L7N259 170 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Cd151O35566 253 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Rhox5P52651 210 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Mrgprb1Q3UG61 350 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Tex24Q5DP50 351 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Scn3bQ8BHK2 215 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Gucy1b2Q8BXH3 824 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Utp6Q8VCY6 597 aaKnown RBP15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ndufs1Q91VD9 727 aaKnown RBP15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 2010005H15RikQ9D8D6 97 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Habp4Q9JKS5 411 aaKnown RBP15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 PigqQ9QYT7 581 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 TfebQ9R210 475 aa15.7■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Zfp472B0V2W5 534 aa15.69■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Zyg11bQ3UFS0 744 aa15.69■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Dnajc1Q61712 552 aaKnown RBP15.69■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Rhbdf2Q80WQ6 827 aa15.69■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Epb41l5Q8BGS1 731 aa15.69■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Exoc3l1Q8BI71 739 aa15.69■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Tmem74Q8BQU7 305 aa15.69■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Pomgnt2Q8BW41 605 aa15.69■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ttc23Q8CHY7 488 aa15.69■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 A930018M24RikB7ZMY3 218 aa15.69■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Gm20509G3UZF1 325 aa15.69■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms