RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ugt2a1Q80X89 528 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Clec2eQ80XD9 204 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Nmur2Q8BZ39 395 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tmem154Q8C4Q9 181 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Erich5Q8K0S2 362 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Hip1Q8VD75 1029 aaKnown RBP13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Q922R1 422 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Lrrc4Q99PH1 652 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tma16Q9CR02 221 aaKnown RBP13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Klhdc8bQ9D2D9 354 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Rin2Q9D684 903 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ten1Q9D7K2 161 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Dbn1Q9QXS6 706 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 RecqlQ9Z129 648 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Bscl2Q9Z2E9 383 aa13.07□□□□□ -0.32
Nup88-203ENSMUST00000108531 Zbed5B2RPU8 756 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Zfp384E9Q1A5 584 aaKnown RBP13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gm5160F8VPN3 147 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gm5145F8VQ88 278 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 P01740 135 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Sbk3P0C5K0 361 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Mc4rP56450 332 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Atp5jP97450 108 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 HdxQ14B70 692 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Glp2rQ5IXF8 512 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Hspa1aQ61696 641 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Kctd13Q8BGV7 329 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Snx17Q8BVL3 470 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Zmiz2Q8CIE2 920 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Smg8Q8VE18 991 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Olfr30Q8VGD8 315 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Pcdha11Q91Y19 950 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Dhrs1Q99L04 313 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Slamf8Q9D3G2 278 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Echdc3Q9D7J9 300 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Sept6Q9R1T4 434 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Cyp2c69E9PXC3 491 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Krt4P07744 525 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Cyp2c40P56657 491 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Psme3P61290 254 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Hbq1bQ3U0A6 142 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Zfp217Q3U0X6 1041 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Afap1l2Q5DTU0 825 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tas2r125Q7M710 311 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Elmo2Q8BHL5 732 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Grsf1Q8C5Q4 479 aaKnown RBP13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Spdye4bQ8CDE8 236 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ppp4r1Q8K2V1 951 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gtse1Q8R080 741 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Rgs10Q9CQE5 181 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ccdc130Q9D516 385 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Dus2Q9D7B1 493 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Cacng3Q9JJV5 315 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Fbxo16Q9QZM9 334 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 Syt5Q9R0N5 386 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 ThadaA8C756 1938 aa13.06□□□□□ -0.32
Nup88-203ENSMUST00000108531 CitP49025 2055 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Znf683I7HJS4 458 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Vmn2r88L7N1W8 857 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Eno3P21550 434 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 ZfaP23607 742 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tlx1P43345 332 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 ClgnP52194 611 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ag2Q3UPL5 249 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Q6GQU0 248 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ip6k1Q6PD10 433 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Scd4Q6T707 353 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Reps2Q80XA6 521 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ric8bQ80XE1 520 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Suds3Q8BR65 328 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Peli3Q8BXR6 445 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Slc44a2Q8BY89 706 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Aqp12Q8CHJ2 290 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tbc1d19Q8VDV7 526 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Exd2Q8VEG4 650 aaKnown RBP13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Sntg2Q925E0 539 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Abcg3Q99P81 650 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 P2yr13Q9D8I2 337 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Chrnb2Q9ERK7 501 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Homer2Q9QWW1 354 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tnip3A0A1D5RMN0 279 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 1700024B05RikE9Q6D7 167 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Top3aO70157 1003 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 En1P09065 401 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ezh1P70351 747 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Fam83fQ3UKU4 495 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Trim67Q505D9 768 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Arcn1Q5XJY5 511 aaKnown RBP13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Rad9bQ6WBX7 403 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Jade1Q6ZPI0 834 aaKnown RBP13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Wdr91Q7TMQ7 748 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Rnf168Q80XJ2 565 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Fam163bQ8BUM6 167 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Otud7aQ8R554 926 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 BsndQ8VIM4 307 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Prkag2Q91WG5 566 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Atpaf2Q91YY4 289 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ubxn2aQ99KJ0 258 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Cnot11Q9CWN7 505 aa13.05□□□□□ -0.32
Nup88-203ENSMUST00000108531 Spata1Q9D5R4 444 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms