RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Capn13Q3UW68 665 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Wdr18Q4VBE8 431 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Rnf215Q5SPX3 379 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Pabpc5Q8C7D3 381 aaKnown RBP12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Cstf2tQ8C7E9 632 aaKnown RBP12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Sulf1Q8K007 870 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Rilpl2Q99LE1 197 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Abcg3Q99P81 650 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Cnbd2Q9D5U8 673 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 1700016D06RikQ9DAA5 166 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Cd302Q9DCG2 228 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Myg1Q9JK81 380 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Adcy1O88444 1118 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Spdye4aQ5IBH6 268 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Mapre1Q61166 268 aaKnown RBP12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Deup1Q7M6Y5 601 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Kirrel1Q80W68 789 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Samd4bQ80XS6 687 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Znf598Q80YR4 908 aaKnown RBP12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Dennd1cQ8CFK6 786 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Il36gQ8R460 164 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Slco1a5Q91YY5 670 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ssxb1Q9CPU1 170 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Mrps17Q9CQE3 120 aaKnown RBP12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Zfp623Q9CY99 499 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Cog8Q9JJA2 640 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Usp21Q9QZL6 566 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 Adam17Q9Z0F8 827 aa12.5□□□□□ -0.41
Trim23-201ENSMUST00000022225 TazI7HJS2 263 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Dnajb6O54946 365 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Tp63O88898 680 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Pde4aO89084 844 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Cct8P42932 548 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Terf1P70371 421 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Arcn1Q5XJY5 511 aaKnown RBP12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Myl6Q60605 151 aaKnown RBP12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Q6P2K3 674 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Prl3a1Q78Y73 227 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Abcg2Q7TMS5 657 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Tex13c3Q810P0 219 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ccdc184Q8BMK5 191 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Pak5Q8C015 719 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Tma7Q8K003 64 aaKnown RBP12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Stx5Q8K1E0 355 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Mtss1Q8R1S4 759 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ppp2r2dQ925E7 453 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Mcrs1Q99L90 462 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ifitm3Q9CQW9 137 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ccdc77Q9CZH8 489 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Shmt2Q9CZN7 504 aaKnown RBP12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Pinx1Q9CZX5 332 aaKnown RBP12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Q9D2Q3 444 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Il23aQ9EQ14 196 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ndst3Q9EQH7 873 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 AadatQ9WVM8 425 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Bnc1O35914 961 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Cetn1P41209 172 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Nr4a2Q06219 598 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ifi47Q61635 420 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ddx55Q6ZPL9 600 aaKnown RBP12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 SyncripQ7TMK9 623 aaKnown RBP12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Moxd2Q7TT41 619 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Cxcr1Q810W6 351 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Sap130Q8BIH0 1057 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Aste1Q8BIR2 672 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ptk7Q8BKG3 1062 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Mical2Q8BML1 960 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Prkaa2Q8BRK8 552 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 VcpkmtQ8C436 228 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Asb2Q8K0L0 634 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Slc36a1Q8K4D3 475 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Mkl1Q8K4J6 964 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ugp2Q91ZJ5 508 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Idh3aQ9D6R2 366 aaKnown RBP12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Alg13Q9D8C3 1166 aaKnown RBP12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ybx3Q9JKB3 361 aaKnown RBP12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Abhd1Q9QZC8 412 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Gm28363A0A087WQW2 129 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 CN725425A0A087WRU1 652 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ccnyl1D3YUJ3 367 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Morf4l1P60762 362 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Hpcal1P62748 193 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Mpp1P70290 466 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 CiitaP79621 1155 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Kcnj13P86046 360 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Fmo3P97501 534 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Cry1P97784 606 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Dnal1Q05A62 190 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ptcd3Q14C51 685 aaKnown RBP12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Ei24Q61070 340 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Rundc3bQ6PDC0 408 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Slc16a12Q8BGC3 486 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Itpk1Q8BYN3 419 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Calhm4Q8CE93 315 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Steap3Q8CI59 488 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Bst2Q8R2Q8 172 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Mcoln3Q8R4F0 553 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 PrkxQ922R0 355 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 Lpin3Q99PI4 848 aa12.49□□□□□ -0.41
Trim23-201ENSMUST00000022225 MydgfQ9CPT4 166 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 57.4 ms