RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PAFAH1B3Q15102 231 aaKnown RBP9.61□□□□□ -0.87
PHGDH-228ENST00000641847 SIX1Q15475 284 aaPredicted RBP9.61□□□□□ -0.87
PHGDH-228ENST00000641847 EML3Q32P44 896 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 MPPE1Q53F39 396 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 C2orf27AQ580R0 203 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 CHST9Q7L1S5 443 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 NLRP14Q86W24 1093 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 MINDY1Q8N5J2 469 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 NPWQ8N729 165 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 LSM14AQ8ND56 463 aaKnown RBP9.61□□□□□ -0.87
PHGDH-228ENST00000641847 DDI1Q8WTU0 396 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 BHMTQ93088 406 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 OTUB2Q96DC9 234 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 TMA16Q96EY4 203 aaKnown RBP9.61□□□□□ -0.87
PHGDH-228ENST00000641847 CELF6Q96J87 481 aaKnown RBP9.61□□□□□ -0.87
PHGDH-228ENST00000641847 FAM118BQ9BPY3 351 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 ECT2Q9H8V3 914 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 L2HGDHQ9H9P8 463 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 FBRSL1Q9HCM7 1045 aaKnown RBP9.61□□□□□ -0.87
PHGDH-228ENST00000641847 SPHK2Q9NRA0 654 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 DKK4Q9UBT3 224 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 MBD1Q9UIS9 605 aaPredicted RBP9.61□□□□□ -0.87
PHGDH-228ENST00000641847 PILRBQ9UKJ0 227 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 URB1O60287 2271 aaKnown RBP9.61□□□□□ -0.87
PHGDH-228ENST00000641847 SPTA1P02549 2419 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 OTOL1A6NHN0 477 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-228ENST00000641847 NEDD8-MDP1E9PL57 170 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 ARHGAP33O14559 1287 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 MCF2LO15068 1137 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 ZBTB24O43167 697 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-228ENST00000641847 CLDN11O75508 207 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 LUC7L3O95232 432 aaKnown RBP9.6□□□□□ -0.87
PHGDH-228ENST00000641847 MAP3K6O95382 1288 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 NFATC1O95644 943 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 CYP17A1P05093 508 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 PLA2G2AP14555 144 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 ARSAP15289 507 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 HOXD9P28356 352 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-228ENST00000641847 OR1E1P30953 314 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 P2RY2P41231 377 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 PTGER3P43115 390 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 MAPKAPK2P49137 400 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 FAM193AP78312 1265 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 C2orf54Q08AI8 447 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 CDH18Q13634 790 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 NOMO1Q15155 1222 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 CRY1Q16526 586 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 FYB2Q5VWT5 728 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 SLC36A4Q6YBV0 504 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 ZNF572Q7Z3I7 529 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-228ENST00000641847 TMEM25Q86YD3 366 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 ABCA7Q8IZY2 2146 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 PGBD3Q8N328 593 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 CARNMT1Q8N4J0 409 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 CCDC33Q8N5R6 958 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 CEP112Q8N8E3 955 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 PRELID2Q8N945 189 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 TTC13Q8NBP0 860 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 NETO2Q8NC67 525 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 SPATA4Q8NEY3 305 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 MDGA1Q8NFP4 955 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 ACTL9Q8TC94 416 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 C1orf54Q8WWF1 131 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 ATG4AQ8WYN0 398 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 P3H4Q92791 437 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 P2RY11Q96G91 374 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 CARD6Q9BX69 1037 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 BBS2Q9BXC9 721 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 FRMD8P1Q9BZ68 369 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-228ENST00000641847 LINC00597Q9H2U6 94 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 RETREG1Q9H6L5 497 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 TMEM74BQ9NUR3 256 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 NDFIP2Q9NV92 336 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 DTLQ9NZJ0 730 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 MARK1Q9P0L2 795 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 SAE1Q9UBE0 346 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-228ENST00000641847 ZNF212Q9UDV6 495 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 MMP17Q9ULZ9 603 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 HEY1Q9Y5J3 304 aa9.6□□□□□ -0.87
PHGDH-228ENST00000641847 HECTD1Q9ULT8 2610 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 A0A087WV48 116 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.59□□□□□ -0.87
PHGDH-228ENST00000641847 CTAGE15A4D2H0 777 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 DFFAO00273 331 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 PPP1R12AO14974 1030 aaPredicted RBP9.59□□□□□ -0.87
PHGDH-228ENST00000641847 LIASO43766 372 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 SH3BP5O60239 455 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 RAMP2O60895 175 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 PHF2O75151 1096 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 ADH1CP00326 375 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 PENKP01210 267 aaPredicted RBP9.59□□□□□ -0.87
PHGDH-228ENST00000641847 RHOCP08134 193 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 CTAGE8P0CG41 777 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 ADH5P11766 374 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 MX2P20592 715 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 ITPKAP23677 461 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 ABCG1P45844 678 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 NR2C2P49116 596 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 SEC13P55735 322 aa9.59□□□□□ -0.87
PHGDH-228ENST00000641847 EIF3EP60228 445 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms