RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 NME3Q13232 169 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 GRIN2CQ14957 1233 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 RAP1GAP2Q684P5 730 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 PDPK2PQ6A1A2 396 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ASTLQ6HA08 431 aaPredicted RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 KIAA0930Q6ICG6 404 aaPredicted RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 C1orf54Q8WWF1 131 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 OXNAD1Q96HP4 312 aaPredicted RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 TMEM121Q9BTD3 319 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 CCDC134Q9H6E4 229 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ETNK1Q9HBU6 452 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 TOR1BO14657 336 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 CCL16O15467 120 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 STK10O94804 968 aaKnown RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 PSMC3P17980 439 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 CCNFP41002 786 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 CAMK2GQ13555 558 aaPredicted RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 LBRQ14739 615 aaKnown RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 TYSND1Q2T9J0 566 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 TMEM196Q5HYL7 178 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 NPNTQ6UXI9 565 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 EPB41L5Q9HCM4 733 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 MED4Q9NPJ6 270 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 SMARCAL1Q9NZC9 954 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 CCL26Q9Y258 94 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ZCWPW2A0A1B0GU75 182 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 GOLGA6CA6NDK9 693 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 GOLGA6BA6NDN3 693 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 PRR19A6NJB7 356 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 SOX1O00570 391 aaPredicted RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 RIPK2O43353 540 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 GOLGA6DP0CG33 693 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 HLA-FP30511 346 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 KIR2DL1P43626 348 aaPredicted RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 CDO1Q16878 200 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 DNAJC21Q5F1R6 531 aaKnown RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 PITRM1Q5JRX3 1037 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 CFAP58Q5T655 872 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ZDHHC20Q5W0Z9 365 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 NAPEPLDQ6IQ20 393 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 TDRD5Q8NAT2 981 aaKnown RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ATG4AQ8WYN0 398 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 TMA16Q96EY4 203 aaKnown RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ASIC4Q96FT7 647 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 CORO1BQ9BR76 489 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 POLR1EQ9GZS1 481 aaKnown RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 PCED1AQ9H1Q7 454 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ATXN3LQ9H3M9 355 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 KDM4CQ9H3R0 1056 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 POPDC3Q9HBV1 291 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 GKN1Q9NS71 199 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 GOLGA6AQ9NYA3 693 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 CFAP97Q9P2B7 532 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 VPS51Q9UID3 782 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 SCML1Q9UN30 329 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 E7EVH7 732 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 DAPK3O43293 454 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 HLA-DQB2P05538 268 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 GSTM1P09488 218 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 HADHAP40939 763 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ITGA8P53708 1063 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 STARD6P59095 220 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 RNASE9P60153 205 aaKnown RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 GSTM4Q03013 218 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 LMAN2Q12907 356 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ZNF177Q13360 481 aaPredicted RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 STAT4Q14765 748 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ELF2Q15723 593 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ZNF658BQ4V348 819 aaPredicted RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 DARS2Q6PI48 645 aaKnown RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ADGRD1Q6QNK2 874 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 CHSY1Q86X52 802 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 LGI2Q8N0V4 545 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ADAM32Q8TC27 787 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 HDAC8Q9BY41 377 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 GPR27Q9NS67 375 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 ARGLU1Q9NWB6 273 aaPredicted RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 HPCAL4Q9UM19 191 aa6.29□□□□□ -1.4
RGPD1-206ENST00000641458 MRPS23Q9Y3D9 190 aaKnown RBP6.29□□□□□ -1.4
RGPD1-206ENST00000641458 PIK3R2O00459 728 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 CYP4F8P98187 520 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 PDE1BQ01064 536 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 ZBTB16Q05516 673 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 SPANXN3Q5MJ09 141 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 IZUMO3Q5VZ72 239 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 TMEM215Q68D42 235 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 RETSATQ6NUM9 610 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 FAM117BQ6P1L5 589 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 GPIHBP1Q8IV16 184 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 CCDC105Q8IYK2 499 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 TTC30BQ8N4P2 665 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 ATPAF2Q8N5M1 289 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 PIH1D2Q8WWB5 315 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 CLDN23Q96B33 292 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 THG1LQ9NWX6 298 aaKnown RBP6.28□□□□□ -1.4
RGPD1-206ENST00000641458 MTRF1LQ9UGC7 380 aaKnown RBP6.28□□□□□ -1.4
RGPD1-206ENST00000641458 TMEM110-MUSTN1A8MSY1 372 aa6.28□□□□□ -1.4
RGPD1-206ENST00000641458 EIF3FO00303 357 aaPredicted RBP6.28□□□□□ -1.4
RGPD1-206ENST00000641458 C2CD2LO14523 706 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms