RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 YME1L1Q96TA2 773 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 AGAP2Q99490 1192 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 TTLL2Q9BWV7 592 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 WWP1Q9H0M0 922 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 CHRAC1Q9NRG0 131 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 SNX15Q9NRS6 342 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 AFF4Q9UHB7 1163 aaKnown RBP15.33■□□□□ 0.04
TRIM3-215ENST00000639856 HBS1LQ9Y450 684 aaKnown RBP15.33■□□□□ 0.04
TRIM3-215ENST00000639856 MAFKO60675 156 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 ABLIM3O94929 683 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 PRKCGP05129 697 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 KITP10721 976 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 FGF3P11487 239 aaPredicted RBP15.32■□□□□ 0.04
TRIM3-215ENST00000639856 EZRP15311 586 aaKnown RBP15.32■□□□□ 0.04
TRIM3-215ENST00000639856 TPH1P17752 444 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 CALB2P22676 271 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 SERPINB8P50452 374 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 C1QTNF8P60827 252 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 TRIP4Q15650 581 aaPredicted RBP15.32■□□□□ 0.04
TRIM3-215ENST00000639856 FSTL4Q6MZW2 842 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 C16orf59Q7L2K0 433 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 TTC7BQ86TV6 843 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 KCNMB4Q86W47 210 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 ZNF683Q8IZ20 524 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 ZNF461Q8TAF7 563 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 USP33Q8TEY7 942 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 ZNF419Q96HQ0 510 aaPredicted RBP15.32■□□□□ 0.04
TRIM3-215ENST00000639856 IL12RB2Q99665 862 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 HERC2P3Q9BVR0 1158 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 SLC39A8Q9C0K1 460 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 NMUR2Q9GZQ4 415 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 CYP4F11Q9HBI6 524 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 SPG21Q9NZD8 308 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 TMEM216Q9P0N5 145 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 SLC2A3P11169 496 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 LAG3P18627 525 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 TUFMP49411 452 aaKnown RBP15.32■□□□□ 0.04
TRIM3-215ENST00000639856 GTF2A1P52655 376 aaPredicted RBP15.32■□□□□ 0.04
TRIM3-215ENST00000639856 CMC1Q7Z7K0 106 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 ALYREFQ86V81 257 aaKnown RBP15.32■□□□□ 0.04
TRIM3-215ENST00000639856 FAM13CQ8NE31 585 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 FCRL5Q96RD9 977 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 UBE2OQ9C0C9 1292 aaKnown RBP15.32■□□□□ 0.04
TRIM3-215ENST00000639856 OLA1Q9NTK5 396 aaKnown RBP15.32■□□□□ 0.04
TRIM3-215ENST00000639856 C20orf96Q9NUD7 363 aaPredicted RBP15.32■□□□□ 0.04
TRIM3-215ENST00000639856 COMMD8Q9NX08 183 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 COPG2Q9UBF2 871 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 MARCOQ9UEW3 520 aaPredicted RBP15.32■□□□□ 0.04
TRIM3-215ENST00000639856 L3MBTL1Q9Y468 752 aa15.32■□□□□ 0.04
TRIM3-215ENST00000639856 ZBBXA8MT70 800 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 MATN3O15232 486 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 IGLV3-27P01718 113 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 HMGA1P17096 107 aaKnown RBP15.31■□□□□ 0.04
TRIM3-215ENST00000639856 KCNA4P22459 653 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 NMBRP28336 390 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 KCNQ1P51787 676 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 CSE1LP55060 971 aaKnown RBP15.31■□□□□ 0.04
TRIM3-215ENST00000639856 AQP5P55064 265 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 NRG1Q02297 640 aaPredicted RBP15.31■□□□□ 0.04
TRIM3-215ENST00000639856 MPP3Q13368 585 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 CCDC153Q494R4 210 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 ALFQ53S48 1182 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 RAP1GAP2Q684P5 730 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 TFAP2DQ7Z6R9 452 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.31■□□□□ 0.04
TRIM3-215ENST00000639856 RTL3Q8N8U3 475 aaKnown RBP15.31■□□□□ 0.04
TRIM3-215ENST00000639856 SPATA22Q8NHS9 363 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 AZIN2Q96A70 460 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 ATXN7L3BQ96GX2 97 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 C1orf74Q96LT6 269 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 ZNF512Q96ME7 567 aaPredicted RBP15.31■□□□□ 0.04
TRIM3-215ENST00000639856 MIPEPQ99797 713 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 BTBD10Q9BSF8 475 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 KIFC1Q9BW19 673 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 YIPF1Q9Y548 306 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 TIMM44O43615 452 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 ITM2AO43736 263 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 ANXA9O76027 345 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 CNTN5O94779 1100 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 SERPINE1P05121 402 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 URODP06132 367 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 ATP5BP06576 529 aaKnown RBP15.31■□□□□ 0.04
TRIM3-215ENST00000639856 SLC1A6P48664 564 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 DDX53Q86TM3 631 aaKnown RBP15.31■□□□□ 0.04
TRIM3-215ENST00000639856 WDR75Q8IWA0 830 aaKnown RBP15.31■□□□□ 0.04
TRIM3-215ENST00000639856 PIWIL2Q8TC59 973 aaKnown RBP15.31■□□□□ 0.04
TRIM3-215ENST00000639856 IGSF8Q969P0 613 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 MYEOVQ96EZ4 313 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 SIKE1Q9BRV8 207 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 MCMBPQ9BTE3 642 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 TMEM106CQ9BVX2 250 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 NOL6Q9H6R4 1146 aaKnown RBP15.31■□□□□ 0.04
TRIM3-215ENST00000639856 GLOD4Q9HC38 313 aa15.31■□□□□ 0.04
TRIM3-215ENST00000639856 RPL26L1Q9UNX3 145 aaKnown RBP15.31■□□□□ 0.04
TRIM3-215ENST00000639856 EFCAB14O75071 495 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 GJB5O95377 273 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 MT-CYBP00156 380 aaPredicted RBP15.3■□□□□ 0.04
TRIM3-215ENST00000639856 MPOP05164 745 aa15.3■□□□□ 0.04
TRIM3-215ENST00000639856 ESRRAP11474 423 aaPredicted RBP15.3■□□□□ 0.04
TRIM3-215ENST00000639856 GRK2P25098 689 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms