RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 SPTY2D1-AS1A0A0U1RR47 76 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 CCDC189A1A4V9 331 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 hCG_1984214I3L0E3 225 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 PLRG1O43660 514 aaKnown RBP3.6□□□□□ -1.83
CCDC7-213ENST00000639290 SOAT2O75908 522 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 ESRRAP11474 423 aaPredicted RBP3.6□□□□□ -1.83
CCDC7-213ENST00000639290 NMT1P30419 496 aaKnown RBP3.6□□□□□ -1.83
CCDC7-213ENST00000639290 GLRBP48167 497 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 LIMK2P53671 638 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 PSMC5P62195 406 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 CENPCQ03188 943 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 SOX4Q06945 474 aaPredicted RBP3.6□□□□□ -1.83
CCDC7-213ENST00000639290 CCDC15Q0P6D6 951 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 NFATC2Q13469 925 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 PWP1Q13610 501 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 KEAP1Q14145 624 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 CFAP221Q4G0U5 840 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 ANO6Q4KMQ2 910 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 DUS1LQ6P1R4 473 aaKnown RBP3.6□□□□□ -1.83
CCDC7-213ENST00000639290 PIM3Q86V86 326 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 CXorf67Q86X51 503 aaPredicted RBP3.6□□□□□ -1.83
CCDC7-213ENST00000639290 P3H2Q8IVL5 708 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 ZNF713Q8N859 430 aaPredicted RBP3.6□□□□□ -1.83
CCDC7-213ENST00000639290 CPLX3Q8WVH0 158 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 JPH3Q8WXH2 748 aaPredicted RBP3.6□□□□□ -1.83
CCDC7-213ENST00000639290 IP6K3Q96PC2 410 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 OMDQ99983 421 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 RSRP1Q9BUV0 290 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 TTYH3Q9C0H2 523 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 CLEC4MQ9H2X3 399 aaPredicted RBP3.6□□□□□ -1.83
CCDC7-213ENST00000639290 KMT5AQ9NQR1 393 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 MARCH2Q9P0N8 246 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 SEC63Q9UGP8 760 aaKnown RBP3.6□□□□□ -1.83
CCDC7-213ENST00000639290 LSM7Q9UK45 103 aaKnown RBP3.6□□□□□ -1.83
CCDC7-213ENST00000639290 SAMM50Q9Y512 469 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 RNF215Q9Y6U7 377 aa3.6□□□□□ -1.83
CCDC7-213ENST00000639290 TACC2O95359 2948 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 DYNC2H1Q8NCM8 4307 aaKnown RBP3.59□□□□□ -1.83
CCDC7-213ENST00000639290 ZNF840PA6NDX5 716 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 TGFB1I1O43294 461 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 STK17BO94768 372 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 KRT18P05783 430 aaKnown RBP3.59□□□□□ -1.83
CCDC7-213ENST00000639290 FURINP09958 794 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 CCL4P13236 92 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 CREB1P16220 341 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 HNRNPA2B1P22626 353 aaKnown RBP3.59□□□□□ -1.83
CCDC7-213ENST00000639290 GARSP41250 739 aaKnown RBP3.59□□□□□ -1.83
CCDC7-213ENST00000639290 EPHB1P54762 984 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 GDF10P55107 478 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 DMPKQ09013 629 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 MYBPHQ13203 477 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 ERV3-1Q14264 604 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 HLTFQ14527 1009 aaKnown RBP eCLIP3.59□□□□□ -1.83
CCDC7-213ENST00000639290 EMC2Q15006 297 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 CST6Q15828 149 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 ARHGAP44Q17R89 818 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 PPP4R3AQ6IN85 833 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 C6orf15Q6UXA7 325 aaPredicted RBP3.59□□□□□ -1.83
CCDC7-213ENST00000639290 OTUD6AQ7L8S5 288 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 CDC20BQ86Y33 519 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 ZBTB8OSQ8IWT0 167 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 GPATCH11Q8N954 259 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 CRYGNQ8WXF5 182 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 GTF3C6Q969F1 213 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 RBMXL1Q96E39 390 aaKnown RBP3.59□□□□□ -1.83
CCDC7-213ENST00000639290 KIF1BPQ96EK5 621 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 NUDT9Q9BW91 350 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 DNAJC28Q9NX36 388 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 PDP2Q9P2J9 529 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 MKL2Q9ULH7 1088 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 ATP8A1Q9Y2Q0 1164 aa3.59□□□□□ -1.83
CCDC7-213ENST00000639290 NYNRINQ9P2P1 1898 aaKnown RBP3.59□□□□□ -1.84
CCDC7-213ENST00000639290 DYSFO75923 2080 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 NEDD8-MDP1E9PL57 170 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 TSPAN6O43657 245 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 NUDT21O43809 227 aaKnown RBP3.59□□□□□ -1.84
CCDC7-213ENST00000639290 LDHAP00338 332 aaKnown RBP3.59□□□□□ -1.84
CCDC7-213ENST00000639290 KLKB1P03952 638 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 ARL2P36404 184 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 CCL11P51671 97 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 ZNF445P59923 1031 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 NOP14P78316 857 aaKnown RBP3.59□□□□□ -1.84
CCDC7-213ENST00000639290 TSPY1Q01534 308 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 DNASE1L3Q13609 305 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 DAZAP2Q15038 168 aaPredicted RBP3.59□□□□□ -1.84
CCDC7-213ENST00000639290 ELOCQ15369 112 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 SAFBQ15424 915 aaKnown RBP eCLIP3.59□□□□□ -1.84
CCDC7-213ENST00000639290 CERCAMQ5T4B2 595 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 OGFOD3Q6PK18 319 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 TMEM207Q6UWW9 146 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 VSTM1Q6UX27 236 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 DSTYKQ6XUX3 929 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 CUZD1Q86UP6 607 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 RAVER1Q8IY67 606 aaKnown RBP3.59□□□□□ -1.84
CCDC7-213ENST00000639290 TTC16Q8NEE8 873 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 FDCSPQ8NFU4 85 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 GANCQ8TET4 914 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 ASB12Q8WXK4 309 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 NRGNQ92686 78 aa3.59□□□□□ -1.84
CCDC7-213ENST00000639290 INPP5DQ92835 1189 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms