RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 PRKAA1Q13131 559 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 SETD3Q86TU7 594 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-215ENST00000639145 CPNE8Q86YQ8 564 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 PLD5Q8N7P1 536 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 ST13P5Q8NFI4 369 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-215ENST00000639145 FAR2Q96K12 515 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 MAGEB18Q96M61 343 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 C16orf70Q9BSU1 422 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 GKN1Q9NS71 199 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 CACNA2D2Q9NY47 1150 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 ZNHIT2Q9UHR6 403 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 NOCTQ9UK39 431 aaKnown RBP13.78□□□□□ -0.2
SCARB2-215ENST00000639145 FBXO5Q9UKT4 447 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 PTPRJQ12913 1337 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 C9IYK1 514 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 MAGEA9P43362 315 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 SLC39A4Q6P5W5 647 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 C16orf89Q6UX73 402 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 GPSM1Q86YR5 675 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 SLC22A9Q8IVM8 553 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 SUGP1Q8IWZ8 645 aaKnown RBP13.78□□□□□ -0.2
SCARB2-215ENST00000639145 SEZ6LQ9BYH1 1024 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 AGO3Q9H9G7 860 aaKnown RBP13.78□□□□□ -0.2
SCARB2-215ENST00000639145 GLOD4Q9HC38 313 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 GDF3Q9NR23 364 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 DUOX1Q9NRD9 1551 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 CYP1A1P04798 512 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-215ENST00000639145 GATMP50440 423 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 PFKFB4Q16877 469 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 EML3Q32P44 896 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 AGKQ53H12 422 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 CERCAMQ5T4B2 595 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 FAM151BQ6UXP7 276 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 KCTD15Q96SI1 283 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-215ENST00000639145 ERVK-5Q9HDB9 667 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 RAB21Q9UL25 225 aa13.78□□□□□ -0.2
SCARB2-215ENST00000639145 ABHD14A-ACY1A0A1B0GW23 586 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 SLC38A8A6NNN8 435 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 CHRNB2P17787 502 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 SKOR1P84550 965 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 TP53BP2Q13625 1128 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 AUHQ13825 339 aaKnown RBP13.77□□□□□ -0.2
SCARB2-215ENST00000639145 TEX44Q53QW1 395 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 SH3PXD2AQ5TCZ1 1133 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 DNAJB7Q7Z6W7 309 aaPredicted RBP13.77□□□□□ -0.2
SCARB2-215ENST00000639145 TMEM139Q8IV31 216 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 CLEC4FQ8N1N0 589 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 STK40Q8N2I9 435 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 OR8D1Q8WZ84 308 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 NAF1Q96HR8 494 aaKnown RBP13.77□□□□□ -0.2
SCARB2-215ENST00000639145 MAGED4Q96JG8 741 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 TNKS2Q9H2K2 1166 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 MIEF1Q9NQG6 463 aa13.77□□□□□ -0.2
SCARB2-215ENST00000639145 NR5A2O00482 541 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 PIGRP01833 764 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 FAM46CQ5VWP2 391 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 MTSS1LQ765P7 747 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 MILR1Q7Z6M3 343 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 FNIP1Q8TF40 1166 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 RBBP8Q99708 897 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 PIF1Q9H611 641 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 YY1AP1Q9H869 796 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 MRGBPQ9NV56 204 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 RWDD3Q9Y3V2 267 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 STRCQ7RTU9 1775 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 TM9SF1O15321 606 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 SLC25A14O95258 325 aaPredicted RBP13.77□□□□□ -0.21
SCARB2-215ENST00000639145 DNTTP04053 509 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 ELFN1P0C7U0 828 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 CSF2RAP15509 400 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 INPP1P49441 399 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 JAM2P57087 298 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 CNKSR3Q6P9H4 555 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 CNSTQ6PJW8 725 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 ANKS1BQ7Z6G8 1248 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 SLC41A1Q8IVJ1 513 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 EME1Q96AY2 570 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 NRBF2Q96F24 287 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 NDRG2Q9UN36 371 aaKnown RBP13.77□□□□□ -0.21
SCARB2-215ENST00000639145 ARHGAP26Q9UNA1 814 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 PCDHGC4Q9Y5F7 938 aa13.77□□□□□ -0.21
SCARB2-215ENST00000639145 KCNU1A8MYU2 1149 aa13.76□□□□□ -0.21
SCARB2-215ENST00000639145 TULP2O00295 520 aa13.76□□□□□ -0.21
SCARB2-215ENST00000639145 TPP1O14773 563 aa13.76□□□□□ -0.21
SCARB2-215ENST00000639145 NFATC1O95644 943 aa13.76□□□□□ -0.21
SCARB2-215ENST00000639145 GPD2P43304 727 aa13.76□□□□□ -0.21
SCARB2-215ENST00000639145 NOMO1Q15155 1222 aa13.76□□□□□ -0.21
SCARB2-215ENST00000639145 SCARA3Q6AZY7 606 aa13.76□□□□□ -0.21
SCARB2-215ENST00000639145 DNAJC14Q6Y2X3 702 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-215ENST00000639145 MTDHQ86UE4 582 aaKnown RBP13.76□□□□□ -0.21
SCARB2-215ENST00000639145 C11orf74Q86VG3 221 aa13.76□□□□□ -0.21
SCARB2-215ENST00000639145 AGGF1Q8N302 714 aaeCLIP13.76□□□□□ -0.21
SCARB2-215ENST00000639145 SPATA6LQ8N4H0 392 aa13.76□□□□□ -0.21
SCARB2-215ENST00000639145 AHCYL2Q96HN2 611 aaKnown RBP13.76□□□□□ -0.21
SCARB2-215ENST00000639145 EBNA1BP2Q99848 306 aaKnown RBP13.76□□□□□ -0.21
SCARB2-215ENST00000639145 SIX2Q9NPC8 291 aa13.76□□□□□ -0.21
SCARB2-215ENST00000639145 ARHGEF4Q9NR80 690 aa13.76□□□□□ -0.21
SCARB2-215ENST00000639145 CHCHD3Q9NX63 227 aaKnown RBP13.76□□□□□ -0.21
SCARB2-215ENST00000639145 APPL1Q9UKG1 709 aa13.76□□□□□ -0.21
SCARB2-215ENST00000639145 GPSM3Q9Y4H4 160 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms