RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 SIN3BO75182 1162 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 CDC45O75419 566 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 JRKO75564 520 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 CYP2A6P11509 494 aaPredicted RBP4.45□□□□□ -1.7
GABRA1-220ENST00000638159 CDH3P22223 829 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 CDC27P30260 824 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 ACTN3Q08043 901 aaPredicted RBP4.45□□□□□ -1.7
GABRA1-220ENST00000638159 KCNMA1Q12791 1236 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 RAPSNQ13702 412 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 CLCA4Q14CN2 919 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 LRRC14Q15048 493 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 SKOR2Q2VWA4 1001 aaPredicted RBP4.45□□□□□ -1.7
GABRA1-220ENST00000638159 HNRNPA1L2Q32P51 320 aaKnown RBP4.45□□□□□ -1.7
GABRA1-220ENST00000638159 ERN2Q76MJ5 926 aaKnown RBP4.45□□□□□ -1.7
GABRA1-220ENST00000638159 KIF18BQ86Y91 864 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 SAP25Q8TEE9 199 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 ING2Q9H160 280 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 NEUROG2Q9H2A3 272 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 IKZF4Q9H2S9 585 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 MINDY3Q9H8M7 445 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 CYP4F12Q9HCS2 524 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 INTUQ9ULD6 942 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 KCNJ14Q9UNX9 436 aa4.45□□□□□ -1.7
GABRA1-220ENST00000638159 TRAV17A0A0B4J275 112 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 FAM90A27PA6NNH2 459 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 D6RAR5 112 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 NKX2-8O15522 239 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 NOL4O94818 638 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 PYGLP06737 847 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 CSKP41240 450 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 PEX5P50542 639 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 YPEL5P62699 121 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 DEUP1Q05D60 604 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 RUNX1T1Q06455 604 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 PPP2R5CQ13362 524 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 STK38Q15208 465 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 TLR1Q15399 786 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 STILQ15468 1287 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 UGCGQ16739 394 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 INSCQ1MX18 579 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 CCDC38Q502W7 563 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 C6orf163Q5TEZ5 329 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 FIGLAQ6QHK4 219 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 GPD1LQ8N335 351 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 LIX1Q8N485 282 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 CCHCR1Q8TD31 782 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 KCTD13Q8WZ19 329 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 MTFMTQ96DP5 389 aaKnown RBP4.44□□□□□ -1.7
GABRA1-220ENST00000638159 CNPPD1Q9BV87 410 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 VN1R3Q9BXE9 311 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 TMEM168Q9H0V1 697 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 IFT122Q9HBG6 1241 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 KCND2Q9NZV8 630 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 SEC14L3Q9UDX4 400 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 TBX20Q9UMR3 447 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 HS3ST3A1Q9Y663 406 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.44□□□□□ -1.7
GABRA1-220ENST00000638159 GSAPA4D1B5 854 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 TOR1BO14657 336 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 KIAA0513O60268 411 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 SMPD2O60906 423 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 STK17BO94768 372 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 SMC2O95347 1197 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 TSPAN12O95859 305 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 FCARP24071 287 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 HOXA11P31270 313 aaPredicted RBP4.44□□□□□ -1.7
GABRA1-220ENST00000638159 MFAP3P55082 362 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 CFAP221Q4G0U5 840 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 Q71RC1 249 aaPredicted RBP4.44□□□□□ -1.7
GABRA1-220ENST00000638159 PCDH19Q8TAB3 1148 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 LURAP1Q96LR2 239 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 PPP1R10Q96QC0 940 aaKnown RBP4.44□□□□□ -1.7
GABRA1-220ENST00000638159 PCIF1Q9H4Z3 704 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 CRTAC1Q9NQ79 661 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.44□□□□□ -1.7
GABRA1-220ENST00000638159 NEU2Q9Y3R4 380 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 A0A087WWV3 80 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 IGKV6D-21A0A0A0MT36 114 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 ACOT7O00154 380 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 PTGESO14684 152 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 PRPF4O43172 522 aaKnown RBP eCLIP4.44□□□□□ -1.7
GABRA1-220ENST00000638159 MED7O43513 233 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 KIAA0754O94854 1291 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 PCCBP05166 539 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 ITIH1P19827 911 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 LRPAP1P30533 357 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 UGT1A3P35503 534 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 GPR1P46091 355 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 SLC5A3P53794 718 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 GUCY1B3Q02153 619 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 GRM3Q14832 879 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 DLG2Q15700 870 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 PTPRNQ16849 979 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 TTC39BQ5VTQ0 682 aaPredicted RBP4.44□□□□□ -1.7
GABRA1-220ENST00000638159 CACHD1Q5VU97 1274 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 CREB3L3Q68CJ9 461 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 RAET1GQ6H3X3 334 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 TTI2Q6NXR4 508 aa4.44□□□□□ -1.7
GABRA1-220ENST00000638159 MARK2Q7KZI7 788 aaKnown RBP4.44□□□□□ -1.7
GABRA1-220ENST00000638159 DNAAF3Q8N9W5 541 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms