RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 RAP2CQ9Y3L5 183 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 LRRC42Q9Y546 428 aa12.3□□□□□ -0.44
CLN8-212ENST00000637083 A0A087X1B8 175 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 OR6C75A6NL08 312 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 PSMG1O95456 288 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 MT-CYBP00156 380 aaPredicted RBP12.29□□□□□ -0.44
CLN8-212ENST00000637083 HLA-DQB2P05538 268 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 CKBP12277 381 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 HOXD10P28358 340 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 CSRP3P50461 194 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 SLC12A2P55011 1212 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 RAB10P61026 200 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 SMARCB1Q12824 385 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 POU6F1Q14863 301 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 KPNB1Q14974 876 aaKnown RBP12.29□□□□□ -0.44
CLN8-212ENST00000637083 SMAD1Q15797 465 aaKnown RBP12.29□□□□□ -0.44
CLN8-212ENST00000637083 KHDC1Q4VXA5 237 aaKnown RBP12.29□□□□□ -0.44
CLN8-212ENST00000637083 RFWD3Q6PCD5 774 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 RANBP10Q6VN20 620 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 TNS4Q8IZW8 715 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 PPFIBP2Q8ND30 876 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 AZIN2Q96A70 460 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 SCYL1Q96KG9 808 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 RANBP9Q96S59 729 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 ACE2Q9BYF1 805 aaPredicted RBP12.29□□□□□ -0.44
CLN8-212ENST00000637083 CAB39LQ9H9S4 337 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 ARNT2Q9HBZ2 717 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 TMEM248Q9NWD8 314 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 VTI1BQ9UEU0 232 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 ANGPTL2Q9UKU9 493 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 PTPRDP23468 1912 aa12.29□□□□□ -0.44
CLN8-212ENST00000637083 H0Y3Z8 333 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 VAPBO95292 243 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 AHSGP02765 367 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 YWHAQP27348 245 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 VHLP40337 213 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 CPA2P48052 419 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 CD151P48509 253 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 PTDSS1P48651 473 aaKnown RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 COPAP53621 1224 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 CLNS1AP54105 237 aaKnown RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 SLC34A1Q06495 639 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 PRKAA1Q13131 559 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 LAMB3Q13751 1172 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 MARC1Q5VT66 337 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 DENND5AQ6IQ26 1287 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 ZNF280DQ6N043 979 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 EPGNQ6UW88 154 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 MAB21L3Q8N8X9 362 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 PDCD6IPQ8WUM4 868 aaKnown RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 NAF1Q96HR8 494 aaKnown RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 HHIPL1Q96JK4 782 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 BTN2A3PQ96KV6 586 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 MYCBPQ99417 103 aaPredicted RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 TSEN34Q9BSV6 310 aaKnown RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 DRC3Q9H069 523 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 TMEM161AQ9NX61 479 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 IL37Q9NZH6 218 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 STX18Q9P2W9 335 aaKnown RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 ZNF212Q9UDV6 495 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 RUVBL2Q9Y230 463 aaKnown RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 NLRC5Q86WI3 1866 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 FAM95CA0A1B0GW59 222 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 PMPCBO75439 489 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 PAPSS2O95340 614 aaPredicted RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 OR4Q2P0C623 313 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 SERPINB5P36952 375 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 KPNA1P52294 538 aaPredicted RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 IRF9Q00978 393 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 POU4F1Q01851 419 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 UBAP2LQ14157 1087 aaKnown RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 TRIP4Q15650 581 aaPredicted RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 DLG2Q15700 870 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 CTXN3Q4LDR2 81 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 ACSBG2Q5FVE4 666 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 RTN4RL1Q86UN2 441 aaPredicted RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 ZNF280BQ86YH2 543 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 LMNTD2Q8IXW0 634 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 ABI1Q8IZP0 508 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 TDRD5Q8NAT2 981 aaKnown RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 C2CD4AQ8NCU7 369 aaPredicted RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 MRGPRX2Q96LB1 330 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 THTPAQ9BU02 230 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 OXCT2Q9BYC2 517 aaPredicted RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 ELAC1Q9H777 363 aaKnown RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 SP110Q9HB58 689 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 TLR8Q9NR97 1041 aaKnown RBP12.28□□□□□ -0.44
CLN8-212ENST00000637083 TREX1Q9NSU2 369 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 DNAJB4Q9UDY4 337 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 PLA2G4CQ9UP65 541 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 CASP8AP2Q9UKL3 1982 aa12.28□□□□□ -0.44
CLN8-212ENST00000637083 GOLGA8QA0A0J9YX86 632 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 E2F8A0AVK6 867 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 GOLGA8OA6NCC3 632 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 F8W810 466 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 GOLGA8NF8WBI6 632 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 ZNF195O14628 629 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 SLC22A2O15244 555 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 FKBP6O75344 327 aa12.27□□□□□ -0.44
CLN8-212ENST00000637083 NCF2P19878 526 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms