RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 RETP07949 1114 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 ACSL1P33121 698 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 DRD3P35462 400 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 CDKN2BP42772 138 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 PTGER3P43115 390 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 MARCKSL1P49006 195 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 DNA2P51530 1060 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 CCNHP51946 323 aaPredicted RBP9.9□□□□□ -0.83
LINC00339-210ENST00000635675 SNRPD1P62314 119 aaKnown RBP9.9□□□□□ -0.83
LINC00339-210ENST00000635675 RPL6Q02878 288 aaKnown RBP9.9□□□□□ -0.83
LINC00339-210ENST00000635675 SFSWAPQ12872 951 aaKnown RBP9.9□□□□□ -0.83
LINC00339-210ENST00000635675 IFI16Q16666 785 aaKnown RBP9.9□□□□□ -0.83
LINC00339-210ENST00000635675 MYLK3Q32MK0 819 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 ARSIQ5FYB1 569 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 FAM46CQ5VWP2 391 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 SLC9A4Q6AI14 798 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 MFSD7Q6UXD7 560 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 FAM124AQ86V42 546 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 LRRC49Q8IUZ0 686 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 TMEFF1Q8IYR6 380 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 KATNAL2Q8IYT4 538 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 HDDC3Q8N4P3 179 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 RNF10Q8N5U6 811 aaKnown RBP9.9□□□□□ -0.83
LINC00339-210ENST00000635675 PLD5Q8N7P1 536 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 OR2AP1Q8NGE2 309 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 PIP4K2CQ8TBX8 421 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 RUBCNQ92622 972 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 KRT35Q92764 455 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 RNF25Q96BH1 459 aaPredicted RBP9.9□□□□□ -0.83
LINC00339-210ENST00000635675 ZNF599Q96NL3 588 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 HEPHQ9BQS7 1158 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 GPR174Q9BXC1 333 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 TM6SF2Q9BZW4 377 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 NEUROG2Q9H2A3 272 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 SERGEFQ9UGK8 458 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 FZD4Q9ULV1 537 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 NCKAP1Q9Y2A7 1128 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 PCDHA3Q9Y5H8 950 aa9.9□□□□□ -0.83
LINC00339-210ENST00000635675 FAM186AA6NE01 2351 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 A0A1W2PP55 124 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 BCLAF3A2AJT9 711 aaKnown RBP9.89□□□□□ -0.83
LINC00339-210ENST00000635675 C10orf142B7Z368 130 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 C1QTNF3-AMACRE9PGA6 284 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 PLK4O00444 970 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 MFSD11O43934 449 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 NDUFS2O75306 463 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 LEFTY1O75610 366 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 PALMO75781 387 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 RNASEH2AO75792 299 aaKnown RBP9.89□□□□□ -0.83
LINC00339-210ENST00000635675 EPN2O95208 641 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 ZRANB2O95218 330 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINC00339-210ENST00000635675 POP4O95707 220 aaKnown RBP9.89□□□□□ -0.83
LINC00339-210ENST00000635675 DMDP11532 3685 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 CTNNA2P26232 953 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 CTNNA1P35221 906 aaKnown RBP9.89□□□□□ -0.83
LINC00339-210ENST00000635675 DHPSP49366 369 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-210ENST00000635675 PEX5P50542 639 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 RHOAP61586 193 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 GBE1Q04446 702 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 GALNT2Q10471 571 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 SLC10A2Q12908 348 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-210ENST00000635675 RFTN1Q14699 578 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-210ENST00000635675 ATXN7L2Q5T6C5 722 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-210ENST00000635675 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-210ENST00000635675 ZNF662Q6ZS27 426 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 NT5DC3Q86UY8 548 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 ALYREFQ86V81 257 aaKnown RBP9.89□□□□□ -0.83
LINC00339-210ENST00000635675 SLC41A1Q8IVJ1 513 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 RCOR2Q8IZ40 523 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 DCLK2Q8N568 766 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 DEFB119Q8N690 84 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 CADM4Q8NFZ8 388 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 EXD1Q8NHP7 514 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 GANCQ8TET4 914 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 LRIG1Q96JA1 1093 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 GDAP1L1Q96MZ0 367 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 TSGA13Q96PP4 275 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 OMDQ99983 421 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 MAK16Q9BXY0 300 aaKnown RBP9.89□□□□□ -0.83
LINC00339-210ENST00000635675 BTBD1Q9H0C5 482 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 PCED1AQ9H1Q7 454 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 SP110Q9HB58 689 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 SGK2Q9HBY8 427 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 DTLQ9NZJ0 730 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 NCDNQ9UBB6 729 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 IL36AQ9UHA7 158 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 GMEB2Q9UKD1 530 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINC00339-210ENST00000635675 PCDHGA5Q9Y5G8 931 aa9.89□□□□□ -0.83
LINC00339-210ENST00000635675 ZNF292O60281 2723 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 PTPRZ1P23471 2315 aaPredicted RBP9.88□□□□□ -0.83
LINC00339-210ENST00000635675 GVINP1Q7Z2Y8 2422 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 CCDC66A2RUB6 948 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 METTL12A8MUP2 240 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 KPNA3O00505 521 aaPredicted RBP9.88□□□□□ -0.83
LINC00339-210ENST00000635675 KRIT1O00522 736 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 APOL1O14791 398 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 SLC7A4O43246 635 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 KRT86O43790 486 aa9.88□□□□□ -0.83
LINC00339-210ENST00000635675 NRDCO43847 1150 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms