RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 AGO4Q9HCK5 861 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 LIN7CQ9NUP9 197 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 GAR1Q9NY12 217 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 DACT1Q9NYF0 836 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PLK2Q9NYY3 685 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 IGSF9Q9P2J2 1179 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PLEKHB1Q9UF11 243 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 VPS51Q9UID3 782 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 UTS2RQ9UKP6 389 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 AGO2Q9UKV8 859 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 CAPN11Q9UMQ6 739 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 TNFSF13BQ9Y275 285 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 B3GNT3Q9Y2A9 372 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 UBE2J1Q9Y385 318 aaPredicted RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 PCDHA10Q9Y5I2 948 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ARFGEF1Q9Y6D6 1849 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 SLIT1O75093 1534 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 COL18A1P39060 1754 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 COL14A1Q05707 1796 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ANKRD36CQ5JPF3 1778 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 BCORQ6W2J9 1755 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 ARFGEF2Q9Y6D5 1785 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 IQSEC2Q5JU85 1478 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 SCAF11Q99590 1463 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 MBD5Q9P267 1494 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 CLIP1P30622 1438 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 CEP162Q5TB80 1403 aa1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 DICER1Q9UPY3 1922 aaKnown RBP1.23□□□□□ -2.21
SMARCB1-209ENST00000635578 COL15A1P39059 1388 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 ZSWIM8A7E2V4 1837 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 EMSYQ7Z589 1322 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 EVPLQ92817 2033 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 ADAMTSL1Q8N6G6 1762 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 A0A087WV62 115 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 ABHD14A-ACY1A0A1B0GW23 586 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 hCG_1642624A0A1W2PR95 340 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 PLSCR5A0PG75 271 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 GOLGA6L3A6NEY3 463 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 C16orf96A6NNT2 1141 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 EFCAB8A8MWE9 144 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 PRYO14603 147 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 MSI1O43347 362 aaKnown RBP1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 KCNQ3O43525 872 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 RPP40O75818 363 aaKnown RBP1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 ACTL6BO94805 426 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 CBX6O95503 412 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 PPP1R3DO95685 299 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 LDHAP00338 332 aaKnown RBP1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 LDLRP01130 860 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 CSTBP04080 98 aaKnown RBP1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 ITGA5P08648 1049 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 ALDOCP09972 364 aaKnown RBP1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 TFEBP19484 476 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 AZU1P20160 251 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 KLRC2P26717 231 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 GSTM2P28161 218 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 NDUFS1P28331 727 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 CHRNA5P30532 468 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC5A2P31639 672 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 HOXD12P35452 270 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 IDUAP35475 653 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 AARSP49588 968 aaKnown RBP eCLIP1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC37A1P57057 533 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 TMPRSS3P57727 454 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 RHBDL3P58872 404 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 AP2B1P63010 937 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 EEF1A2Q05639 463 aaKnown RBP1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 MTAPQ13126 283 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 PDCLQ13371 301 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 PRKG1Q13976 671 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 DLGAP5Q15398 846 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 SHBQ15464 509 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 AAK1Q2M2I8 961 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 ZACNQ401N2 412 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 ZNF672Q499Z4 452 aaPredicted RBP1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 C6orf10Q5SRN2 563 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 C10orf76Q5T2E6 689 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 ANO1Q5XXA6 986 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 SULT6B1Q6IMI4 303 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 C16orf89Q6UX73 402 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 Q6ZTK2 550 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 PIK3AP1Q6ZUJ8 805 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 SYT13Q7L8C5 426 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 CTU1Q7Z7A3 348 aaKnown RBP1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 TRABD2AQ86V40 505 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 VPS52Q8N1B4 723 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 CLASRPQ8N2M8 674 aaKnown RBP1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 MYCT1Q8N699 235 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 DDX51Q8N8A6 666 aaKnown RBP eCLIP1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 FAM47BQ8NA70 645 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 ADPRHL1Q8NDY3 354 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 C7orf57Q8NEG2 295 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 CTCFLQ8NI51 663 aaPredicted RBP1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 FAM71BQ8TC56 605 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 CSGALNACT1Q8TDX6 532 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 TMEM174Q8WUU8 243 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 AFG1LQ8WV93 481 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 GLMPQ8WWB7 406 aa1.22□□□□□ -2.21
SMARCB1-209ENST00000635578 CPT1BQ92523 772 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms