RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 CHN2P52757 468 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 THOP1P52888 689 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 ATXN3P54252 364 aaPredicted RBP10.86□□□□□ -0.67
PSPC1-207ENST00000635251 PKNOX1P55347 436 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 MPP1Q00013 466 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 ZNF460Q14592 562 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 OGFRL1Q5TC84 451 aaPredicted RBP10.86□□□□□ -0.67
PSPC1-207ENST00000635251 SPATA6LQ8N4H0 392 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 PPHLN1Q8NEY8 458 aaKnown RBP10.86□□□□□ -0.67
PSPC1-207ENST00000635251 ZMIZ2Q8NF64 920 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 NPLOC4Q8TAT6 608 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 PIP4K2CQ8TBX8 421 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 STYXQ8WUJ0 223 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 PGAP3Q96FM1 320 aaPredicted RBP10.86□□□□□ -0.67
PSPC1-207ENST00000635251 DCUN1D1Q96GG9 259 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 ELMO2Q96JJ3 720 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 MCMBPQ9BTE3 642 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 SIK2Q9H0K1 926 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 ZNF408Q9H9D4 720 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 FAM95CA0A1B0GW59 222 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 BTBD19C9JJ37 291 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 MT-CYBP00156 380 aaPredicted RBP10.86□□□□□ -0.67
PSPC1-207ENST00000635251 FAM163BP0C2L3 166 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 STMN1P16949 149 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 MSX2P35548 267 aaPredicted RBP10.86□□□□□ -0.67
PSPC1-207ENST00000635251 PSEN2P49810 448 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 ZNF135P52742 658 aaPredicted RBP10.86□□□□□ -0.67
PSPC1-207ENST00000635251 CRYBB1P53674 252 aaPredicted RBP10.86□□□□□ -0.67
PSPC1-207ENST00000635251 RAB10P61026 200 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 GRB14Q14449 540 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 RAB41Q5JT25 222 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 RARS2Q5T160 578 aaKnown RBP10.86□□□□□ -0.67
PSPC1-207ENST00000635251 PKN3Q6P5Z2 889 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 PLEKHH3Q7Z736 793 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 DENND6AQ8IWF6 608 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 ATPAF2Q8N5M1 289 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 CPSF7Q8N684 471 aaKnown RBP10.86□□□□□ -0.67
PSPC1-207ENST00000635251 RNF148Q8N7C7 305 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 CNTD1Q8N815 330 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 LENG1Q96BZ8 264 aaPredicted RBP10.86□□□□□ -0.67
PSPC1-207ENST00000635251 NXNL1Q96CM4 212 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 SGF29Q96ES7 293 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 BTBD9Q96Q07 612 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 PPP1R10Q96QC0 940 aaKnown RBP10.86□□□□□ -0.67
PSPC1-207ENST00000635251 OMDQ99983 421 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 FICDQ9BVA6 458 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 RHOBTB2Q9BYZ6 727 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 Q9H521 79 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 WDR41Q9HAD4 459 aa10.86□□□□□ -0.67
PSPC1-207ENST00000635251 PDCD11Q14690 1871 aaKnown RBP10.85□□□□□ -0.67
PSPC1-207ENST00000635251 CCL15-CCL14A0A0B4J2E2 113 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 SLC22A2O15244 555 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 DLX3O60479 287 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 COL6A2P12110 1019 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 XRCC1P18887 633 aaPredicted RBP10.85□□□□□ -0.67
PSPC1-207ENST00000635251 CXCR3P49682 368 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 SLC12A2P55011 1212 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 RPL26P61254 145 aaKnown RBP10.85□□□□□ -0.67
PSPC1-207ENST00000635251 CNGA3Q16281 694 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 CCL15Q16663 113 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 ZNF423Q2M1K9 1284 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 FBXL19Q6PCT2 694 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 DCLRE1AQ6PJP8 1040 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 ARHGAP36Q6ZRI8 547 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 TLK2Q86UE8 772 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 TAC4Q86UU9 113 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 LCA5Q86VQ0 697 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 PGAM4Q8N0Y7 254 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 TMEM86AQ8N2M4 240 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 TMEM151AQ8N4L1 468 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 BHLHE22Q8NFJ8 381 aaPredicted RBP10.85□□□□□ -0.67
PSPC1-207ENST00000635251 UPF1Q92900 1129 aaKnown RBP eCLIP10.85□□□□□ -0.67
PSPC1-207ENST00000635251 TMA16Q96EY4 203 aaKnown RBP10.85□□□□□ -0.67
PSPC1-207ENST00000635251 SMARCD1Q96GM5 515 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 COPS7BQ9H9Q2 264 aaPredicted RBP10.85□□□□□ -0.67
PSPC1-207ENST00000635251 EFCAB1Q9HAE3 211 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 TMEM30AQ9NV96 361 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 SLC38A7Q9NVC3 462 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 GTSE1Q9NYZ3 720 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 FIS1Q9Y3D6 152 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 PTCH2Q9Y6C5 1203 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 TSC2P49815 1807 aa10.85□□□□□ -0.67
PSPC1-207ENST00000635251 C15orf38-AP3S2A0A0A6YYH1 394 aa10.84□□□□□ -0.67
PSPC1-207ENST00000635251 MEIS3P2A8K0S8 358 aa10.84□□□□□ -0.67
PSPC1-207ENST00000635251 ANXA9O76027 345 aa10.84□□□□□ -0.67
PSPC1-207ENST00000635251 JUNP05412 331 aaKnown RBP10.84□□□□□ -0.67
PSPC1-207ENST00000635251 ME2P23368 584 aa10.84□□□□□ -0.67
PSPC1-207ENST00000635251 GABRB3P28472 473 aa10.84□□□□□ -0.67
PSPC1-207ENST00000635251 ADSLP30566 484 aaPredicted RBP10.84□□□□□ -0.67
PSPC1-207ENST00000635251 CLCNKBP51801 687 aa10.84□□□□□ -0.67
PSPC1-207ENST00000635251 SEPT6Q14141 434 aa10.84□□□□□ -0.67
PSPC1-207ENST00000635251 PIGGQ5H8A4 983 aa10.84□□□□□ -0.67
PSPC1-207ENST00000635251 SH2D4BQ5SQS7 431 aa10.84□□□□□ -0.67
PSPC1-207ENST00000635251 ESRP1Q6NXG1 681 aaKnown RBP10.84□□□□□ -0.67
PSPC1-207ENST00000635251 ZFP1Q6P2D0 407 aa10.84□□□□□ -0.67
PSPC1-207ENST00000635251 KDELC2Q7Z4H8 507 aa10.84□□□□□ -0.67
PSPC1-207ENST00000635251 ARPINQ7Z6K5 226 aa10.84□□□□□ -0.67
PSPC1-207ENST00000635251 CEP97Q8IW35 865 aa10.84□□□□□ -0.67
PSPC1-207ENST00000635251 CENPLQ8N0S6 344 aaPredicted RBP10.84□□□□□ -0.67
PSPC1-207ENST00000635251 LSMEM2Q8N112 164 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms