RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 FSTL4Q6MZW2 842 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 TTC27Q6P3X3 843 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 DRICH1Q6PGQ1 229 aaPredicted RBP14.7□□□□□ -0.06
LINC00339-208ENST00000634934 CCDC137Q6PK04 289 aaKnown RBP14.7□□□□□ -0.06
LINC00339-208ENST00000634934 GSTA5Q7RTV2 222 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 CCDC105Q8IYK2 499 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 SIX5Q8N196 739 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 FAM71DQ8N9W8 422 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 C12orf50Q8NA57 414 aaPredicted RBP14.7□□□□□ -0.06
LINC00339-208ENST00000634934 ATP11CQ8NB49 1132 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 CEP41Q9BYV8 373 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 PDFQ9HBH1 243 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 PLA2G4CQ9UP65 541 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 ERVW-1Q9UQF0 538 aa14.7□□□□□ -0.06
LINC00339-208ENST00000634934 A0A0A0MRY4 1105 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 CFAP69A5D8W1 941 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 K7ERQ8 282 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 EIF3HO15372 352 aaKnown RBP eCLIP14.69□□□□□ -0.06
LINC00339-208ENST00000634934 MTSS1O43312 755 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 CPP00450 1065 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 IFNB1P01574 187 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 JCHAINP01591 159 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 ITGAVP06756 1048 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 CHRNA3P32297 505 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 TNFRSF4P43489 277 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 RENBPP51606 427 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 ST8SIA6P61647 398 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 SLC10A7Q0GE19 358 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 LBRQ14739 615 aaKnown RBP14.69□□□□□ -0.06
LINC00339-208ENST00000634934 ACCSLQ4AC99 568 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 FNDC3BQ53EP0 1204 aaKnown RBP14.69□□□□□ -0.06
LINC00339-208ENST00000634934 MARC1Q5VT66 337 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 KDM7AQ6ZMT4 941 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 ATL2Q8NHH9 583 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 SHDQ96IW2 340 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 ZNF599Q96NL3 588 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 RUFY1Q96T51 708 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 KRT12Q99456 494 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 RASSF4Q9H2L5 321 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 RBM22Q9NW64 420 aaKnown RBP eCLIP14.69□□□□□ -0.06
LINC00339-208ENST00000634934 SLCO3A1Q9UIG8 710 aa14.69□□□□□ -0.06
LINC00339-208ENST00000634934 DRG1Q9Y295 367 aaKnown RBP14.69□□□□□ -0.06
LINC00339-208ENST00000634934 FCF1Q9Y324 198 aaKnown RBP14.69□□□□□ -0.06
LINC00339-208ENST00000634934 NYNRINQ9P2P1 1898 aaKnown RBP14.69□□□□□ -0.06
LINC00339-208ENST00000634934 ANTXRLA6NF34 631 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 SHISA7A6NL88 538 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 HMGB1P1B2RPK0 211 aaPredicted RBP14.68□□□□□ -0.06
LINC00339-208ENST00000634934 K7EQS6 105 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 RNF103O00237 685 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 SMAD6O43541 496 aaKnown RBP14.68□□□□□ -0.06
LINC00339-208ENST00000634934 STK10O94804 968 aaKnown RBP14.68□□□□□ -0.06
LINC00339-208ENST00000634934 TMCC1O94876 653 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 HEXIM1O94992 359 aaKnown RBP14.68□□□□□ -0.06
LINC00339-208ENST00000634934 CD160O95971 181 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 PEX11BO96011 259 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 NNMTP40261 264 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 MAGEA9P43362 315 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 MMP13P45452 471 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 FNTAP49354 379 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 SERPINH1P50454 418 aaKnown RBP14.68□□□□□ -0.06
LINC00339-208ENST00000634934 NRLP54845 237 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 GDF10P55107 478 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 ZBTB17Q13105 803 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 HNRNPDQ14103 355 aaKnown RBP14.68□□□□□ -0.06
LINC00339-208ENST00000634934 ZNF235Q14590 738 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 RFTN1Q14699 578 aaPredicted RBP14.68□□□□□ -0.06
LINC00339-208ENST00000634934 KCTD19Q17RG1 926 aaPredicted RBP14.68□□□□□ -0.06
LINC00339-208ENST00000634934 EGFLAMQ63HQ2 1017 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 MAML1Q92585 1016 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 EZH1Q92800 747 aaPredicted RBP14.68□□□□□ -0.06
LINC00339-208ENST00000634934 CINPQ9BW66 212 aaPredicted RBP14.68□□□□□ -0.06
LINC00339-208ENST00000634934 CAPS2Q9BXY5 557 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 USP29Q9HBJ7 922 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 ZDHHC4Q9NPG8 344 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 HS3ST2Q9Y278 367 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 MRPS17Q9Y2R5 130 aaKnown RBP14.68□□□□□ -0.06
LINC00339-208ENST00000634934 TTLL3Q9Y4R7 772 aa14.68□□□□□ -0.06
LINC00339-208ENST00000634934 MIA3Q5JRA6 1907 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 STK25O00506 426 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 ZNF189O75820 626 aaPredicted RBP14.67□□□□□ -0.06
LINC00339-208ENST00000634934 SRPRAP08240 638 aaKnown RBP14.67□□□□□ -0.06
LINC00339-208ENST00000634934 SRCP12931 536 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 PTPN3P26045 913 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 STIP1P31948 543 aaKnown RBP14.67□□□□□ -0.06
LINC00339-208ENST00000634934 TIE1P35590 1138 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 IFI35P80217 286 aaPredicted RBP14.67□□□□□ -0.06
LINC00339-208ENST00000634934 LMNB2Q03252 620 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 ITKQ08881 620 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 WASHC5Q12768 1159 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 CYTH1Q15438 398 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 PTPRNQ16849 979 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 INO80DQ53TQ3 878 aaPredicted RBP14.67□□□□□ -0.06
LINC00339-208ENST00000634934 C2orf27AQ580R0 203 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 BBS5Q8N3I7 341 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 SH2D3CQ8N5H7 860 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.67□□□□□ -0.06
LINC00339-208ENST00000634934 ALLCQ8N6M5 410 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 ZNF513Q8N8E2 541 aaPredicted RBP14.67□□□□□ -0.06
LINC00339-208ENST00000634934 CCDC89Q8N998 374 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 GRK7Q8WTQ7 553 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms