RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 DRAP1Q14919 205 aaPredicted RBP20.56■□□□□ 0.88
TARDBP-228ENST00000629725 C5orf22Q49AR2 442 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 EFHC1Q5JVL4 640 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 PERM1Q5SV97 790 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 EXD3Q8N9H8 876 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 EHBP1Q8NDI1 1231 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 WDR48Q8TAF3 677 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 GLMNQ92990 594 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 GSDMAQ96QA5 445 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 TRIM4Q9C037 500 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 SIK2Q9H0K1 926 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 TNKS2Q9H2K2 1166 aa20.56■□□□□ 0.88
TARDBP-228ENST00000629725 CCDC187A0A096LP49 1063 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 FPGTO14772 594 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 THAP12O43422 761 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 HSF2BPO75031 334 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 GRAP2O75791 330 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 CNTN5O94779 1100 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 ITGA2BP08514 1039 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 ADRB3P13945 408 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 GNA15P30679 374 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 RPIAP49247 311 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 C22orf39Q6P5X5 142 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 LINGO4Q6UY18 593 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 DPY19L3Q6ZPD9 716 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 BTN2A2Q8WVV5 523 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 CEP63Q96MT8 703 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 BOCQ9BWV1 1114 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 SRRTQ9BXP5 876 aaKnown RBP20.55■□□□□ 0.88
TARDBP-228ENST00000629725 ASNSD1Q9NWL6 643 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 ATXN7L1Q9ULK2 861 aaPredicted RBP20.55■□□□□ 0.88
TARDBP-228ENST00000629725 FADS3Q9Y5Q0 445 aa20.55■□□□□ 0.88
TARDBP-228ENST00000629725 SPINT1O43278 529 aa20.54■□□□□ 0.88
TARDBP-228ENST00000629725 EFSO43281 561 aa20.54■□□□□ 0.88
TARDBP-228ENST00000629725 ENDOD1O94919 500 aa20.54■□□□□ 0.88
TARDBP-228ENST00000629725 ITGB7P26010 798 aa20.54■□□□□ 0.88
TARDBP-228ENST00000629725 SGCGQ13326 291 aa20.54■□□□□ 0.88
TARDBP-228ENST00000629725 SPIDRQ14159 915 aa20.54■□□□□ 0.88
TARDBP-228ENST00000629725 ALFQ53S48 1182 aa20.54■□□□□ 0.88
TARDBP-228ENST00000629725 SETD3Q86TU7 594 aaPredicted RBP20.54■□□□□ 0.88
TARDBP-228ENST00000629725 DCAF4L2Q8NA75 395 aa20.54■□□□□ 0.88
TARDBP-228ENST00000629725 NAT6Q93015 286 aa20.54■□□□□ 0.88
TARDBP-228ENST00000629725 LENG8Q96PV6 779 aaPredicted RBP20.54■□□□□ 0.88
TARDBP-228ENST00000629725 SCAND2PQ9GZW5 306 aaPredicted RBP20.54■□□□□ 0.88
TARDBP-228ENST00000629725 SPASTQ9UBP0 616 aa20.54■□□□□ 0.88
TARDBP-228ENST00000629725 WASF2Q9Y6W5 498 aa20.54■□□□□ 0.88
TARDBP-228ENST00000629725 A0A0D9SEW6 157 aa20.53■□□□□ 0.88
TARDBP-228ENST00000629725 CASC3O15234 703 aaKnown RBP20.53■□□□□ 0.88
TARDBP-228ENST00000629725 PDX1P52945 283 aa20.53■□□□□ 0.88
TARDBP-228ENST00000629725 TPRG1LQ5T0D9 272 aa20.53■□□□□ 0.88
TARDBP-228ENST00000629725 C6orf132Q5T0Z8 1188 aa20.53■□□□□ 0.88
TARDBP-228ENST00000629725 ZSCAN30Q86W11 494 aa20.53■□□□□ 0.88
TARDBP-228ENST00000629725 SLC35F3Q8IY50 421 aa20.53■□□□□ 0.88
TARDBP-228ENST00000629725 CPXM1Q96SM3 734 aa20.53■□□□□ 0.88
TARDBP-228ENST00000629725 KLF6Q99612 283 aaPredicted RBP20.53■□□□□ 0.88
TARDBP-228ENST00000629725 CCDC3Q9BQI4 270 aa20.53■□□□□ 0.88
TARDBP-228ENST00000629725 GTPBP4Q9BZE4 634 aaKnown RBP20.53■□□□□ 0.88
TARDBP-228ENST00000629725 SYNDIG1Q9H7V2 258 aa20.53■□□□□ 0.88
TARDBP-228ENST00000629725 ACP6Q9NPH0 428 aa20.53■□□□□ 0.88
TARDBP-228ENST00000629725 APOBEC3BQ9UH17 382 aaKnown RBP20.53■□□□□ 0.88
TARDBP-228ENST00000629725 M0QYT0 321 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 PSMA7O14818 248 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 AP1G1O43747 822 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 GCATO75600 419 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 GJB6O95452 261 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 L1CAMP32004 1257 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 EIF2B5Q13144 721 aaKnown RBP20.52■□□□□ 0.88
TARDBP-228ENST00000629725 STIM1Q13586 685 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 LINC00303Q3SY05 128 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 PRRT3Q5FWE3 981 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 XKR5Q6UX68 686 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 USP53Q70EK8 1073 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 RBFAQ8N0V3 343 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 LIN37Q96GY3 246 aaPredicted RBP20.52■□□□□ 0.88
TARDBP-228ENST00000629725 PPP1R13BQ96KQ4 1090 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 ARHGAP9Q9BRR9 750 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 WDCPQ9H6R7 721 aa20.52■□□□□ 0.88
TARDBP-228ENST00000629725 UBE2TQ9NPD8 197 aaPredicted RBP20.52■□□□□ 0.88
TARDBP-228ENST00000629725 DOCK4Q8N1I0 1966 aa20.52■□□□□ 0.87
TARDBP-228ENST00000629725 IGLON5A6NGN9 336 aa20.51■□□□□ 0.87
TARDBP-228ENST00000629725 PLD2O14939 933 aa20.51■□□□□ 0.87
TARDBP-228ENST00000629725 ZNF821O75541 412 aaPredicted RBP20.51■□□□□ 0.87
TARDBP-228ENST00000629725 SMC2O95347 1197 aa20.51■□□□□ 0.87
TARDBP-228ENST00000629725 ADCY5O95622 1261 aa20.51■□□□□ 0.87
TARDBP-228ENST00000629725 ADKP55263 362 aaKnown RBP20.51■□□□□ 0.87
TARDBP-228ENST00000629725 PFN3P60673 137 aa20.51■□□□□ 0.87
TARDBP-228ENST00000629725 C1orf61Q13536 156 aa20.51■□□□□ 0.87
TARDBP-228ENST00000629725 PTK2BQ14289 1009 aa20.51■□□□□ 0.87
TARDBP-228ENST00000629725 SGF29Q96ES7 293 aa20.51■□□□□ 0.87
TARDBP-228ENST00000629725 DHTKD1Q96HY7 919 aaPredicted RBP20.51■□□□□ 0.87
TARDBP-228ENST00000629725 HEPHQ9BQS7 1158 aa20.51■□□□□ 0.87
TARDBP-228ENST00000629725 C1QTNF2Q9BXJ5 285 aa20.51■□□□□ 0.87
TARDBP-228ENST00000629725 CEP44Q9C0F1 390 aa20.51■□□□□ 0.87
TARDBP-228ENST00000629725 INTS2Q9H0H0 1204 aaKnown RBP20.51■□□□□ 0.87
TARDBP-228ENST00000629725 TKTL2Q9H0I9 626 aa20.51■□□□□ 0.87
TARDBP-228ENST00000629725 TCEAL2Q9H3H9 227 aaPredicted RBP20.51■□□□□ 0.87
TARDBP-228ENST00000629725 RELNP78509 3460 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 LMO7DNF2Z398 122 aa20.5■□□□□ 0.87
TARDBP-228ENST00000629725 NTN3O00634 580 aaPredicted RBP20.5■□□□□ 0.87
TARDBP-228ENST00000629725 TERTO14746 1132 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms