RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 GATA6Q92908 595 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 PGBD4Q96DM1 585 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 TEKT5Q96M29 485 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 IL22Q9GZX6 179 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 UPF3AQ9H1J1 476 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 GOLGA2P5Q9HBQ8 144 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 PAK6Q9NQU5 681 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 IL1RAPL1Q9NZN1 696 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 SLC17A6Q9P2U8 582 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 PIN4Q9Y237 131 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 LRCH1Q9Y2L9 728 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 MOXD2PA6NHM9 499 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 WASH4PA8MWX3 477 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 PRR5-ARHGAP8B1AHC4 643 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 M0QYT0 321 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 M0QZQ0 153 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 CASQ2O14958 399 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 PSMD3O43242 534 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 KPNA6O60684 536 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 ADAMTS4O75173 837 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 KRT36O76013 467 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 FAM200BP0CF97 657 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 COL6A2P12110 1019 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 ARHGAP8P85298 464 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 NSUN2Q08J23 767 aaKnown RBP eCLIP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 ZBTB17Q13105 803 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 GSTA3Q16772 222 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 SH2D4BQ5SQS7 431 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 C1orf146Q5VVC0 180 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 DNAJC14Q6Y2X3 702 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 PDZD4Q76G19 769 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 PID1Q7Z2X4 250 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 C10orf107Q8IVU9 208 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 SCUBE1Q8IWY4 988 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 TP53INP2Q8IXH6 220 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 SLC25A41Q8N5S1 370 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 DNAJC9Q8WXX5 260 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 NDRG1Q92597 394 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 SCLYQ96I15 445 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 IL12RB2Q99665 862 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 CCDC28BQ9BUN5 200 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 LRRC4Q9HBW1 653 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 ATP13A1Q9HD20 1204 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 NSMCE4AQ9NXX6 385 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 LOC100653049A0A140TA62 436 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 YJEFN3A6XGL0 299 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 SPECC1L-ADORA2AF8WAN1 911 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 CLDN5O00501 218 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 NVLO15381 856 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 FKBP6O75344 327 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 CABYRO75952 493 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 KRT34O76011 436 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 WISP3O95389 354 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 APOA4P06727 396 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 ADSLP30566 484 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 TKTL1P51854 596 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 CACNA2D1P54289 1103 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 RPL10AP62906 217 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 SLC14A2Q15849 920 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 UPP1Q16831 310 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 C4orf46Q504U0 113 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 SNX30Q5VWJ9 437 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 EGFLAMQ63HQ2 1017 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 WSCD1Q658N2 575 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 FSTL4Q6MZW2 842 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 TAF2Q6P1X5 1199 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 RASSF3Q86WH2 238 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 DCLK2Q8N568 766 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 TADA1Q96BN2 335 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 PCED1BQ96HM7 432 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 HTATIP2Q9BUP3 242 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 COLEC11Q9BWP8 271 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 OXSMQ9NWU1 459 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 KLHL8Q9P2G9 620 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 VANGL2Q9ULK5 521 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 TXNDC9O14530 226 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 TIMM44O43615 452 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 ATP9BO43861 1147 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 NBNO60934 754 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 ZNF623O75123 536 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 USP12O75317 370 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 RPLP2P05387 115 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 LINGO3P0C6S8 592 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 MX2P20592 715 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 IGFBP6P24592 240 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 ACAT1P24752 427 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 CCNCP24863 283 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 TYK2P29597 1187 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 SPRP35270 261 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 ABCG1P45844 678 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 CLCN2P51788 898 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 DENND5AQ6IQ26 1287 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 GDF6Q6KF10 455 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 ARHGAP12Q8IWW6 846 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 C3orf58Q8NDZ4 430 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 GPR78Q96P69 363 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 HAPLN3Q96S86 360 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 ULBP1Q9BZM6 244 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 CDH19Q9H159 772 aa7.28□□□□□ -1.24
CTNNA1-244ENST00000627109 GIT1Q9Y2X7 761 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms