RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 HDAC8Q9BY41 377 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 LRRC27Q9C0I9 530 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 DYRK4Q9NR20 520 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 NAALADL1Q9UQQ1 740 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 TLR6Q9Y2C9 796 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 DAAM1Q9Y4D1 1078 aa14.2□□□□□ -0.14
SNX1-214ENST00000625244 MTORP42345 2549 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 HIVEP1P15822 2718 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 VPS4BO75351 444 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 MT-CO1P00395 513 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 FYNP06241 537 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 TRIM49P0CI25 452 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 TRIM49CP0CI26 452 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 CCL4P13236 92 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 NR1D1P20393 614 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 PDCP20941 246 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 ITGB7P26010 798 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 ATP1A2P50993 1020 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 CEBPZQ03701 1054 aaKnown RBP14.19□□□□□ -0.14
SNX1-214ENST00000625244 PPP3CAQ08209 521 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 TCEA2Q15560 299 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 KIAA1161Q6NSJ0 714 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 UNC13DQ70J99 1090 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 CHSY1Q86X52 802 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 SLITRK4Q8IW52 837 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 IL22RA1Q8N6P7 574 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 PCDH19Q8TAB3 1148 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 DQX1Q8TE96 717 aaKnown RBP14.19□□□□□ -0.14
SNX1-214ENST00000625244 PMEPA1Q969W9 287 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 INTS4Q96HW7 963 aaKnown RBP14.19□□□□□ -0.14
SNX1-214ENST00000625244 TBATAQ96M53 351 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 LENG8Q96PV6 779 aaPredicted RBP14.19□□□□□ -0.14
SNX1-214ENST00000625244 EPAS1Q99814 870 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 SLC13A1Q9BZW2 595 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 VPS4AQ9UN37 437 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 RNF215Q9Y6U7 377 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 HIVEP3Q5T1R4 2406 aa14.19□□□□□ -0.14
SNX1-214ENST00000625244 ZNF891A8MT65 544 aaPredicted RBP14.18□□□□□ -0.14
SNX1-214ENST00000625244 K7EM74 188 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 K7ERQ8 282 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 CLDN1O95832 211 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 LTFP02788 710 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 PRKAR1AP10644 381 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 SRCP12931 536 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 RGS7P49802 495 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 C16orf72Q14CZ0 275 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 ARSIQ5FYB1 569 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 FAXCQ5TGI0 409 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 TMEM164Q5U3C3 297 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 CCNJLQ8IV13 435 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 GRIN3AQ8TCU5 1115 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 TMEM174Q8WUU8 243 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 IRGQQ8WZA9 623 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 FEM1CQ96JP0 617 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 SERPINB11Q96P15 392 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 C7orf25Q9BPX7 421 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 FEM1AQ9BSK4 669 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 B3GNT4Q9C0J1 378 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 SEMA6CQ9H3T2 930 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 TP53TG5Q9Y2B4 290 aa14.18□□□□□ -0.14
SNX1-214ENST00000625244 FARP1Q9Y4F1 1045 aaPredicted RBP14.18□□□□□ -0.14
SNX1-214ENST00000625244 ESPL1Q14674 2120 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 IGLON5A6NGN9 336 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 DUX1O43812 170 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 NR3C1P04150 777 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 PRNPP04156 253 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 UGT1A3P35503 534 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 VAMP7P51809 220 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 NUCB2P80303 420 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 AMPD3Q01432 767 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 PHF19Q5T6S3 580 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 CEP135Q66GS9 1140 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 FAM173BQ6P4H8 233 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 MAMDC2Q7Z304 686 aaPredicted RBP14.17□□□□□ -0.14
SNX1-214ENST00000625244 TAC4Q86UU9 113 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 GPBAR1Q8TDU6 330 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 SEMA4DQ92854 862 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 RNF34Q969K3 372 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 CDH19Q9H159 772 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 BLZF1Q9H2G9 400 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 MMRN2Q9H8L6 949 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 CUEDC1Q9NWM3 386 aaPredicted RBP14.17□□□□□ -0.14
SNX1-214ENST00000625244 HESX1Q9UBX0 185 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 GPR34Q9UPC5 381 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 DOLKQ9UPQ8 538 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 OR51B4Q9Y5P0 310 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 FADS3Q9Y5Q0 445 aa14.17□□□□□ -0.14
SNX1-214ENST00000625244 F5H5T6 163 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 CNTN5O94779 1100 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 THOP1P52888 689 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 SGCGQ13326 291 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 NNTQ13423 1086 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 PTK2BQ14289 1009 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 ZC3H12AQ5D1E8 599 aaKnown RBP14.16□□□□□ -0.14
SNX1-214ENST00000625244 C1QL3Q5VWW1 255 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 PMF1Q6P1K2 205 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 HEATR4Q86WZ0 1026 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 TTC39CQ8N584 583 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 TEX19Q8NA77 164 aa14.16□□□□□ -0.14
SNX1-214ENST00000625244 GALNT11Q8NCW6 608 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms