RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 LZTS1Q9Y250 596 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 TRIM43BA6NCK2 446 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 SIN3BO75182 1162 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 DCTN3O75935 186 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 STC2O76061 302 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 CNTN5O94779 1100 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 APOA4P06727 396 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 ADH1AP07327 375 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 HLA-DPA1P20036 260 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 WNT3AP56704 352 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 HTRA4P83105 476 aaPredicted RBP16.59■□□□□ 0.25
LDB3-208ENST00000623007 CDK18Q07002 472 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 TWF1Q12792 350 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 FAM133BQ5BKY9 247 aaKnown RBP16.59■□□□□ 0.25
LDB3-208ENST00000623007 SPDYAQ5MJ70 313 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 CERCAMQ5T4B2 595 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 TEDDM1Q5T9Z0 273 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 NADSYN1Q6IA69 706 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 KDELC1Q6UW63 502 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 GALNT7Q86SF2 657 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 TADA1Q96BN2 335 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 TRIM43Q96BQ3 446 aaPredicted RBP16.59■□□□□ 0.25
LDB3-208ENST00000623007 MRGPRX2Q96LB1 330 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 FAM111AQ96PZ2 611 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 SIKE1Q9BRV8 207 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 KLF16Q9BXK1 252 aaPredicted RBP16.59■□□□□ 0.25
LDB3-208ENST00000623007 NT5MQ9NPB1 228 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 RIMKLBQ9ULI2 386 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 ANKRD6Q9Y2G4 727 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 ARIH1Q9Y4X5 557 aaPredicted RBP16.59■□□□□ 0.25
LDB3-208ENST00000623007 USH1CQ9Y6N9 552 aa16.59■□□□□ 0.25
LDB3-208ENST00000623007 CXorf51AA0A1B0GTR3 108 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 GJB5O95377 273 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 TYK2P29597 1187 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 CORO1AP31146 461 aaKnown RBP16.58■□□□□ 0.24
LDB3-208ENST00000623007 MAGEA12P43365 314 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 SERPINH1P50454 418 aaKnown RBP16.58■□□□□ 0.24
LDB3-208ENST00000623007 OXCT1P55809 520 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 PPARDQ03181 441 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 ITKQ08881 620 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 SETDB1Q15047 1291 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 RALGPS1Q5JS13 557 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 PSRC1Q6PGN9 363 aaPredicted RBP16.58■□□□□ 0.24
LDB3-208ENST00000623007 STRA8Q7Z7C7 330 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 SPATA22Q8NHS9 363 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 SCG3Q8WXD2 468 aaKnown RBP16.58■□□□□ 0.24
LDB3-208ENST00000623007 CCT6BQ92526 530 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 CLP1Q92989 425 aaKnown RBP16.58■□□□□ 0.24
LDB3-208ENST00000623007 FEM1CQ96JP0 617 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 TSNARE1Q96NA8 513 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 FCRL3Q96P31 734 aaPredicted RBP16.58■□□□□ 0.24
LDB3-208ENST00000623007 GCNAQ96QF7 691 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 EMILIN2Q9BXX0 1053 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 ZBP1Q9H171 429 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 CHRAC1Q9NRG0 131 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 UBP1Q9NZI7 540 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 LSM7Q9UK45 103 aaKnown RBP16.58■□□□□ 0.24
LDB3-208ENST00000623007 TBC1D30Q9Y2I9 924 aa16.58■□□□□ 0.24
LDB3-208ENST00000623007 SOBPA7XYQ1 873 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 KDELR3O43731 214 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 LILRB3O75022 631 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 PMPCBO75439 489 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 PIAS1O75925 651 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 OLFM2O95897 454 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 MT-CYBP00156 380 aaPredicted RBP16.57■□□□□ 0.24
LDB3-208ENST00000623007 FGBP02675 491 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 FGF1P05230 155 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 ATP5BP06576 529 aaKnown RBP16.57■□□□□ 0.24
LDB3-208ENST00000623007 SERPINF2P08697 491 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 ERVK-10P10266 1014 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 COL6A2P12110 1019 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 KCNQ1P51787 676 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 SLC10A7Q0GE19 358 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 THOC5Q13769 683 aaKnown RBP16.57■□□□□ 0.24
LDB3-208ENST00000623007 ZKSCAN8Q15776 578 aaPredicted RBP16.57■□□□□ 0.24
LDB3-208ENST00000623007 DENND5AQ6IQ26 1287 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 METTL3Q86U44 580 aaKnown RBP16.57■□□□□ 0.24
LDB3-208ENST00000623007 DENND1CQ8IV53 801 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 PHOSPHO2Q8TCD6 241 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 MRPS31Q92665 395 aaKnown RBP16.57■□□□□ 0.24
LDB3-208ENST00000623007 MFSD3Q96ES6 412 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 TRIM55Q9BYV6 548 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 RHOJQ9H4E5 214 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 FAM96AQ9H5X1 160 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 PCMTD2Q9NV79 361 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 SLC17A7Q9P2U7 560 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 IRAK3Q9Y616 596 aa16.57■□□□□ 0.24
LDB3-208ENST00000623007 ZFP37Q9Y6Q3 630 aaPredicted RBP16.57■□□□□ 0.24
LDB3-208ENST00000623007 HMX2A2RU54 273 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 J3KR12 359 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 MYO1CO00159 1063 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 FGF18O76093 207 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 LRG1P02750 347 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 MBL2P11226 248 aaPredicted RBP16.56■□□□□ 0.24
LDB3-208ENST00000623007 HOXB8P17481 243 aaPredicted RBP16.56■□□□□ 0.24
LDB3-208ENST00000623007 CDC25CP30307 473 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 BMPR2Q13873 1038 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 HSP90AA5PQ58FG0 334 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 HJURPQ8NCD3 748 aaPredicted RBP16.56■□□□□ 0.24
LDB3-208ENST00000623007 PPM1EQ8WY54 764 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms