RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 FBXW4P57775 412 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ALDH6A1Q02252 535 aaKnown RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ZNF284Q2VY69 593 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 SLC44A4Q53GD3 710 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 AMIGO3Q86WK7 504 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 TBC1D19Q8N5T2 526 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 C12orf50Q8NA57 414 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ACMSDQ8TDX5 336 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 VPS33AQ96AX1 596 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ADAM28Q9UKQ2 775 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 PAIP2BQ9ULR5 123 aaKnown RBP16.34■□□□□ 0.21
GABRB3-215ENST00000622697 ST3GAL5Q9UNP4 418 aa16.34■□□□□ 0.21
GABRB3-215ENST00000622697 GPC1P35052 558 aa16.33■□□□□ 0.21
GABRB3-215ENST00000622697 ATXN1P54253 815 aaKnown RBP16.33■□□□□ 0.21
GABRB3-215ENST00000622697 ZIK1Q3SY52 487 aaPredicted RBP16.33■□□□□ 0.21
GABRB3-215ENST00000622697 RBM15BQ8NDT2 890 aaKnown RBP16.33■□□□□ 0.21
GABRB3-215ENST00000622697 UTP15Q8TED0 518 aaKnown RBP16.33■□□□□ 0.21
GABRB3-215ENST00000622697 MAGED4Q96JG8 741 aa16.33■□□□□ 0.21
GABRB3-215ENST00000622697 SH3GL1Q99961 368 aa16.33■□□□□ 0.21
GABRB3-215ENST00000622697 LPIN3Q9BQK8 851 aa16.33■□□□□ 0.21
GABRB3-215ENST00000622697 YIPF2Q9BWQ6 316 aa16.33■□□□□ 0.21
GABRB3-215ENST00000622697 SLC4A5Q9BY07 1137 aa16.33■□□□□ 0.21
GABRB3-215ENST00000622697 PALMDQ9NP74 551 aa16.33■□□□□ 0.21
GABRB3-215ENST00000622697 RAP2CQ9Y3L5 183 aa16.33■□□□□ 0.21
GABRB3-215ENST00000622697 KPNA6O60684 536 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 VNN1O95497 513 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 KRT6AP02538 564 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 KRT6BP04259 564 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 UNGP13051 313 aaPredicted RBP16.33■□□□□ 0.2
GABRB3-215ENST00000622697 KRT6CP48668 564 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 CHN2P52757 468 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 PLD1Q13393 1074 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 MSLNQ13421 630 aaPredicted RBP16.33■□□□□ 0.2
GABRB3-215ENST00000622697 SLC25A52Q3SY17 297 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 SPPL2AQ8TCT8 520 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 USE1Q9NZ43 259 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 RABGEF1Q9UJ41 708 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 CDH9Q9ULB4 789 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 SNX8Q9Y5X2 465 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 SNED1Q8TER0 1413 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 SNRPB2P08579 225 aaKnown RBP16.33■□□□□ 0.2
GABRB3-215ENST00000622697 SP100P23497 879 aaPredicted RBP16.33■□□□□ 0.2
GABRB3-215ENST00000622697 PIK3R1P27986 724 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 NEK3P51956 506 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 LIPMQ5VYY2 423 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 PRMT9Q6P2P2 845 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 TPGS1Q6ZTW0 290 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 FAM35AQ86V20 835 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 CCDC185Q8N715 623 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 ITFG1Q8TB96 612 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 SPATA16Q9BXB7 569 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 HBS1LQ9Y450 684 aaKnown RBP16.33■□□□□ 0.2
GABRB3-215ENST00000622697 FGF10O15520 208 aaPredicted RBP16.33■□□□□ 0.2
GABRB3-215ENST00000622697 GSTT1P30711 240 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 ARHGAP15Q53QZ3 475 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 ADGRD1Q6QNK2 874 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 ZNF572Q7Z3I7 529 aaPredicted RBP16.33■□□□□ 0.2
GABRB3-215ENST00000622697 CCDC103Q8IW40 242 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 DHRSXQ8N5I4 330 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 CHRAC1Q9NRG0 131 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 KANSL3Q9P2N6 904 aa16.33■□□□□ 0.2
GABRB3-215ENST00000622697 MAFBQ9Y5Q3 323 aaPredicted RBP16.33■□□□□ 0.2
GABRB3-215ENST00000622697 FFAR3O14843 346 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 GPR42O15529 346 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.32■□□□□ 0.2
GABRB3-215ENST00000622697 PGBD3Q8N328 593 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 SERAC1Q96JX3 654 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 ZFP42Q96MM3 310 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 CDH19Q9H159 772 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 FBXO5Q9UKT4 447 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 IPPQ9Y573 584 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 C2P06681 752 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 LBPP18428 481 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 CD52P31358 61 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 IL2P60568 153 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 JAG1P78504 1218 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 CAMK2GQ13555 558 aaPredicted RBP16.32■□□□□ 0.2
GABRB3-215ENST00000622697 FBXW8Q8N3Y1 598 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 OSCP1Q8WVF1 389 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 HDAC10Q969S8 669 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 PDZD7Q9H5P4 517 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 KLQ9UEF7 1012 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 NALCNQ8IZF0 1738 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 MLNP12872 115 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 RETSATQ6NUM9 610 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 NUDT18Q6ZVK8 323 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 HPS6Q86YV9 775 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 BBS7Q8IWZ6 715 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 ZMAT2Q96NC0 199 aaKnown RBP16.32■□□□□ 0.2
GABRB3-215ENST00000622697 C1orf50Q9BV19 199 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 RAD23AP54725 363 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 BFSP2Q13515 415 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 TM6SF2Q9BZW4 377 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 RIBC2Q9H4K1 309 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 LINC00032P0C843 101 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 HPCAP84074 193 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 CCDC142Q17RM4 750 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 FCRL2Q96LA5 508 aaPredicted RBP16.32■□□□□ 0.2
GABRB3-215ENST00000622697 EGFL7Q9UHF1 273 aa16.32■□□□□ 0.2
GABRB3-215ENST00000622697 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms