RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 GRIA3P42263 894 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 NKX2-5P52952 324 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 OGDHQ02218 1023 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 BST2Q10589 180 aaKnown RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 CHI3L2Q15782 390 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 NRF1Q16656 503 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 ZACNQ401N2 412 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 PIGGQ5H8A4 983 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 ZFYVE27Q5T4F4 411 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 RNASEH2BQ5TBB1 312 aaKnown RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 RSBN1Q5VWQ0 802 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 DRICH1Q6PGQ1 229 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 TMEM270Q6UE05 265 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 MAMDC4Q6UXC1 1216 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 MFSD7Q6UXD7 560 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 UNC5AQ6ZN44 842 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 PCGF5Q86SE9 256 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 RHOT1Q8IXI2 618 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 CLYBLQ8N0X4 340 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 UBR7Q8N806 425 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 MFSD2AQ8NA29 543 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 BHLHE22Q8NFJ8 381 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 PIWIL2Q8TC59 973 aaKnown RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 TFAP2CQ92754 450 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 GLMNQ92990 594 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 DCPSQ96C86 337 aaKnown RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 MRRFQ96E11 262 aaKnown RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 MAGED4Q96JG8 741 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 ZBTB45Q96K62 511 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 NTPCRQ9BSD7 190 aaKnown RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 TMEM121Q9BTD3 319 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 NAA50Q9GZZ1 169 aaKnown RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 POLR3FQ9H1D9 316 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 COQ10BQ9H8M1 238 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 WDR6Q9NNW5 1121 aaKnown RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 PDLIM7Q9NR12 457 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 NDFIP2Q9NV92 336 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 ARHGAP28Q9P2N2 729 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 KLQ9UEF7 1012 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 TCEAL9Q9UHQ7 104 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 ZNF221Q9UK13 617 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 CAB39Q9Y376 341 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 H0YC42 278 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 GAS2O43903 313 aaKnown RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 PIAS1O75925 651 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 SEC14L2O76054 403 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 NADKO95544 446 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 HOXB1P14653 301 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 ATICP31939 592 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 SFNP31947 248 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 CBX5P45973 191 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 PRKAA2P54646 552 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 MLLT10P55197 1068 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 TPD52P55327 224 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 CLDN10P78369 228 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 NFX1Q12986 1120 aaKnown RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 TRIM32Q13049 653 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 DNASE1L3Q13609 305 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 CUL2Q13617 745 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 GALNT3Q14435 633 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 HIF1AQ16665 826 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 C5orf22Q49AR2 442 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 SEZ6Q53EL9 994 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 NHSL2Q5HYW2 709 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 UBE2UQ5VVX9 321 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 TRIM72Q6ZMU5 477 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 ENOSF1Q7L5Y1 443 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 GSTA5Q7RTV2 222 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 SLC22A16Q86VW1 577 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 NUDCD3Q8IVD9 361 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 ABRAQ8N0Z2 381 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 ANKRD53Q8N9V6 530 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 GALNT11Q8NCW6 608 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 OR5B17Q8NGF7 314 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 JPH3Q8WXH2 748 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 TOP1MTQ969P6 601 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 ZNF560Q96MR9 790 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 SLITRK1Q96PX8 696 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 UHRF1Q96T88 793 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 KLF6Q99612 283 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 BCL7BQ9BQE9 202 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 KCNN2Q9H2S1 579 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 QTRT2Q9H974 415 aaKnown RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 C8orf4Q9NR00 106 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 FBXO8Q9NRD0 319 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 ZNF277Q9NRM2 450 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 PKD2L2Q9NZM6 624 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 MARCOQ9UEW3 520 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 SEPT9Q9UHD8 586 aaPredicted RBP7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 PLLPQ9Y342 182 aa7.6□□□□□ -1.19
TRIM49B-202ENST00000622138 SIP14410 1827 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 PARP14Q460N5 1801 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 MYH9P35579 1960 aaKnown RBP7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 TLR3O15455 904 aaKnown RBP7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 PDPK1O15530 556 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 EXTL3O43909 919 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 ZNF254O75437 659 aa7.59□□□□□ -1.19
TRIM49B-202ENST00000622138 RNASEH2AO75792 299 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms