RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 LMNTD2Q8IXW0 634 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 ULK2Q8IYT8 1036 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 POF1BQ8WVV4 589 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 FAM136AQ96C01 138 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 RBBP8Q99708 897 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 RTP3Q9BQQ7 232 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 ZBP1Q9H171 429 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 LRRC40Q9H9A6 602 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 ENTPD7Q9NQZ7 604 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 MRPL17Q9NRX2 175 aaKnown RBP17.75■□□□□ 0.43
FAM3A-222ENST00000621967 DNAJC28Q9NX36 388 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 TMEM216Q9P0N5 145 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 COX16Q9P0S2 106 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 PTPRDP23468 1912 aa17.75■□□□□ 0.43
FAM3A-222ENST00000621967 FAM72CH0Y354 149 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 NCAM2O15394 837 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 TYK2P29597 1187 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 HARS2P49590 506 aaKnown RBP17.74■□□□□ 0.43
FAM3A-222ENST00000621967 DAOAP59103 153 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 PPIDQ08752 370 aaKnown RBP17.74■□□□□ 0.43
FAM3A-222ENST00000621967 GPM6BQ13491 265 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 FAM72AQ5TYM5 149 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 KCTD11Q693B1 232 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 FAM72DQ6L9T8 149 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 PDZD4Q76G19 769 aaPredicted RBP17.74■□□□□ 0.43
FAM3A-222ENST00000621967 TMC7Q7Z402 723 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 MAVSQ7Z434 540 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 FAM72BQ86X60 149 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 OR52K1Q8NGK4 314 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 OR10T2Q8NGX3 314 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 PGAP3Q96FM1 320 aaPredicted RBP17.74■□□□□ 0.43
FAM3A-222ENST00000621967 OSBPL1AQ9BXW6 950 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 OXCT2Q9BYC2 517 aaPredicted RBP17.74■□□□□ 0.43
FAM3A-222ENST00000621967 CASS4Q9NQ75 786 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 ANLNQ9NQW6 1124 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 TXNDC16Q9P2K2 825 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 SSX2IPQ9Y2D8 614 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 CDH23Q9H251 3354 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 PATJQ8NI35 1801 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 MYLKQ15746 1914 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 OR6C75A6NL08 312 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 ERI2A8K979 691 aaKnown RBP17.74■□□□□ 0.43
FAM3A-222ENST00000621967 I6L893 689 aaPredicted RBP17.74■□□□□ 0.43
FAM3A-222ENST00000621967 KCNK1O00180 336 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 ZNF195O14628 629 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 USP1O94782 785 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 FAM200BP0CF97 657 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 CTSAP10619 480 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 MYL4P12829 197 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 ARRB2P32121 409 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 LIMK2P53671 638 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 MRPL58Q14197 206 aaKnown RBP17.74■□□□□ 0.43
FAM3A-222ENST00000621967 LRIT3Q3SXY7 679 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 CCDC153Q494R4 210 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 PPM1JQ5JR12 505 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 INTS6LQ5JSJ4 861 aaKnown RBP17.74■□□□□ 0.43
FAM3A-222ENST00000621967 CES3Q6UWW8 571 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 SPPL3Q8TCT6 385 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 AUTS2Q8WXX7 1259 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 PANX3Q96QZ0 392 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 TCF25Q9BQ70 676 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 ULBP1Q9BZM6 244 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 TLR9Q9NR96 1032 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 SNX15Q9NRS6 342 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 IL1RAPL1Q9NZN1 696 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 KLHL8Q9P2G9 620 aaPredicted RBP17.74■□□□□ 0.43
FAM3A-222ENST00000621967 SLC7A8Q9UHI5 535 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 SOX13Q9UN79 622 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 TRIOBPQ9H2D6 2365 aa17.74■□□□□ 0.43
FAM3A-222ENST00000621967 ZCWPW2A0A1B0GU75 182 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 H3BNC9 293 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 KLHL2O95198 593 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 CPB1P15086 417 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 MX2P20592 715 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 MAP3K7CLP57077 242 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 ACTR3P61158 418 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 MRPS35P82673 323 aaKnown RBP17.73■□□□□ 0.43
FAM3A-222ENST00000621967 RAB41Q5JT25 222 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 MYLK4Q86YV6 388 aaPredicted RBP17.73■□□□□ 0.43
FAM3A-222ENST00000621967 DCLK2Q8N568 766 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.73■□□□□ 0.43
FAM3A-222ENST00000621967 SLC7A14Q8TBB6 771 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 PPP4R1Q8TF05 950 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 SCG3Q8WXD2 468 aaKnown RBP17.73■□□□□ 0.43
FAM3A-222ENST00000621967 BRD8Q9H0E9 1235 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 CRTAC1Q9NQ79 661 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 KRT82Q9NSB4 513 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 MTRRQ9UBK8 725 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 FBXW11Q9UKB1 542 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 VANGL2Q9ULK5 521 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 APOBEC2Q9Y235 224 aaKnown RBP17.73■□□□□ 0.43
FAM3A-222ENST00000621967 LRCH1Q9Y2L9 728 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 CDY1Q9Y6F8 540 aa17.73■□□□□ 0.43
FAM3A-222ENST00000621967 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.72■□□□□ 0.43
FAM3A-222ENST00000621967 GRM6O15303 877 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 CIB2O75838 187 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 RALBP11234 206 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 SPRP35270 261 aaPredicted RBP17.72■□□□□ 0.43
FAM3A-222ENST00000621967 SERPINB8P50452 374 aa17.72■□□□□ 0.43
FAM3A-222ENST00000621967 ARPP19P56211 112 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms