RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 TLE3Q04726 772 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 LONRF1Q17RB8 773 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 TTC39AQ5SRH9 613 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 GPSM1Q86YR5 675 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 RBMXL3Q8N7X1 1067 aaKnown RBP5.52□□□□□ -1.53
VPS29-212ENST00000621131 ADPRHL1Q8NDY3 354 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 PARD3BQ8TEW8 1205 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 DNAAF4Q8WXU2 420 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 ATP2A3Q93084 1043 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 C18orf8Q96DM3 657 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 CTAGE1Q96RT6 745 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 TMEM204Q9BSN7 226 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 TEX13AQ9BXU3 409 aaPredicted RBP5.52□□□□□ -1.53
VPS29-212ENST00000621131 MYLK2Q9H1R3 596 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 TASP1Q9H6P5 420 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 MAP6D1Q9H9H5 199 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 PCDHA7Q9UN72 937 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 CEP83Q9Y592 693 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 PDE4DIPQ5VU43 2346 aa5.52□□□□□ -1.53
VPS29-212ENST00000621131 KAT6BQ8WYB5 2073 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 TNRC18O15417 2968 aaPredicted RBP5.51□□□□□ -1.53
VPS29-212ENST00000621131 CYP3A7-CYP3A51PA0A087WV96 503 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 MDM4O15151 490 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 NFATC1O95644 943 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 ALDOCP09972 364 aaKnown RBP5.51□□□□□ -1.53
VPS29-212ENST00000621131 PEPDP12955 493 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 CYP3A7P24462 503 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 HSP90AB4PQ58FF6 505 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 ANKRD40Q6AI12 368 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 HMBOX1Q6NT76 420 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 KSR2Q6VAB6 950 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 ADHFE1Q8IWW8 467 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 SMC5Q8IY18 1101 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 ANKRD44Q8N8A2 993 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 OIT3Q8WWZ8 545 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 LPAR1Q92633 364 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 CCDC138Q96M89 665 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 STK33Q9BYT3 514 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 ARHGAP39Q9C0H5 1083 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 RBM38Q9H0Z9 239 aaKnown RBP5.51□□□□□ -1.53
VPS29-212ENST00000621131 SIRT3Q9NTG7 399 aaPredicted RBP5.51□□□□□ -1.53
VPS29-212ENST00000621131 FNIP2Q9P278 1114 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 SLC12A4Q9UP95 1085 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 SLC8A2Q9UPR5 921 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 ZBTB1Q9Y2K1 713 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 PCDHGB2Q9Y5G2 931 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 HEG1Q9ULI3 1381 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 DOT1LQ8TEK3 1739 aa5.51□□□□□ -1.53
VPS29-212ENST00000621131 LACTBL1A8MY62 500 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 NEURL1O76050 574 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 PLA2G2AP14555 144 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 NPPBP16860 134 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 KLRK1P26718 216 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 GNALP38405 381 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 AK2P54819 239 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 TAS2R50P59544 299 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 NUCB1Q02818 461 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 SLC39A6Q13433 755 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 ZNF585BQ52M93 769 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 DGKKQ5KSL6 1271 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 WASHC2DQ5SRD0 308 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 ANKRD45Q5TZF3 282 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 CASC1Q6TDU7 716 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 CYB5R4Q7L1T6 521 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 G2E3Q7L622 706 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 MDGA2Q7Z553 956 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 CHD1LQ86WJ1 897 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 SMRP1Q8NCR6 262 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 IPO4Q8TEX9 1081 aaKnown RBP5.5□□□□□ -1.53
VPS29-212ENST00000621131 WDR60Q8WVS4 1066 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 KIAA1191Q96A73 305 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 MIB2Q96AX9 1013 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 NTPCRQ9BSD7 190 aaKnown RBP5.5□□□□□ -1.53
VPS29-212ENST00000621131 SYT17Q9BSW7 474 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 OSBPL5Q9H0X9 879 aaPredicted RBP5.5□□□□□ -1.53
VPS29-212ENST00000621131 CERS4Q9HA82 394 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 C9orf78Q9NZ63 289 aaPredicted RBP5.5□□□□□ -1.53
VPS29-212ENST00000621131 RAB21Q9UL25 225 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 SLC39A10Q9ULF5 831 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 PHTF1Q9UMS5 762 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 TOGARAM1Q9Y4F4 1720 aa5.5□□□□□ -1.53
VPS29-212ENST00000621131 AFDNP55196 1824 aaKnown RBP5.5□□□□□ -1.53
VPS29-212ENST00000621131 ITGB4P16144 1822 aa5.49□□□□□ -1.53
VPS29-212ENST00000621131 RPS10-NUDT3A0A1W2PQS6 291 aa5.49□□□□□ -1.53
VPS29-212ENST00000621131 PI4KAP2A4QPH2 592 aa5.49□□□□□ -1.53
VPS29-212ENST00000621131 C3orf70A6NLC5 250 aaPredicted RBP5.49□□□□□ -1.53
VPS29-212ENST00000621131 PIP5K1BO14986 540 aa5.49□□□□□ -1.53
VPS29-212ENST00000621131 RPP40O75818 363 aaKnown RBP5.49□□□□□ -1.53
VPS29-212ENST00000621131 STARD3NLO95772 234 aa5.49□□□□□ -1.53
VPS29-212ENST00000621131 ALDOAP04075 364 aaKnown RBP5.49□□□□□ -1.53
VPS29-212ENST00000621131 MYL6BP14649 208 aa5.49□□□□□ -1.53
VPS29-212ENST00000621131 TNFRSF8P28908 595 aa5.49□□□□□ -1.53
VPS29-212ENST00000621131 HOXA11P31270 313 aaPredicted RBP5.49□□□□□ -1.53
VPS29-212ENST00000621131 ADPRHP54922 357 aa5.49□□□□□ -1.53
VPS29-212ENST00000621131 FAM3BP58499 235 aaPredicted RBP5.49□□□□□ -1.53
VPS29-212ENST00000621131 AIMP1Q12904 312 aaKnown RBP5.49□□□□□ -1.53
VPS29-212ENST00000621131 Q5PR19 223 aa5.49□□□□□ -1.53
VPS29-212ENST00000621131 C10orf76Q5T2E6 689 aa5.49□□□□□ -1.53
VPS29-212ENST00000621131 RINT1Q6NUQ1 792 aa5.49□□□□□ -1.53
VPS29-212ENST00000621131 TMEM88Q6PEY1 159 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms