RNA–Protein interactions for RNA: ENST00000620581.4

GRIA3-208, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-208ENST00000620581 GORASP1Q9BQQ3 440 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 SMG9Q9H0W8 520 aaKnown RBP13.65□□□□□ -0.22
GRIA3-208ENST00000620581 ELOVL2Q9NXB9 296 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 NEDD8-MDP1E9PL57 170 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 AP1G1O43747 822 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 KRT14P02533 472 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 SRCP12931 536 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 ALADP13716 330 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 NFKBIAP25963 317 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 CXCR5P32302 372 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 CD70P32970 193 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 CCINQ13939 588 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 C8orf74Q6P047 294 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 C22orf39Q6P5X5 142 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 GALNT7Q86SF2 657 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 ZNF567Q8N184 647 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 CARNMT1Q8N4J0 409 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 OR52K2Q8NGK3 314 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 WFDC5Q8TCV5 224 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 RSAD2Q8WXG1 361 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 NAT9Q9BTE0 207 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 MAGEB5Q9BZ81 275 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 KDM4CQ9H3R0 1056 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 CASS4Q9NQ75 786 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 FETUBQ9UGM5 382 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 PRRC2BQ5JSZ5 2229 aaKnown RBP13.65□□□□□ -0.22
GRIA3-208ENST00000620581 IGSF6O95976 241 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 MMP2P08253 660 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 HLA-DPA1P20036 260 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 NUDT1P36639 197 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 SNRPD1P62314 119 aaKnown RBP13.65□□□□□ -0.22
GRIA3-208ENST00000620581 FSCBQ5H9T9 825 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 IFT20Q8IY31 132 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 HDAC8Q9BY41 377 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 PPCSQ9HAB8 311 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 RAD18Q9NS91 495 aa13.65□□□□□ -0.22
GRIA3-208ENST00000620581 DNAJC17Q9NVM6 304 aaKnown RBP13.65□□□□□ -0.22
GRIA3-208ENST00000620581 UTP11Q9Y3A2 253 aaKnown RBP13.65□□□□□ -0.22
GRIA3-208ENST00000620581 H7C0C1 242 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 RBL1P28749 1068 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 GJC1P36383 396 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 ATP5OP48047 213 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 CREB5Q02930 508 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 HNRNPA1L2Q32P51 320 aaKnown RBP13.64□□□□□ -0.23
GRIA3-208ENST00000620581 NPNTQ6UXI9 565 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 SRLQ86TD4 932 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 ZCCHC9Q8N567 271 aaKnown RBP13.64□□□□□ -0.23
GRIA3-208ENST00000620581 CAVIN3Q969G5 261 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 RAB7BQ96AH8 199 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 CARD6Q9BX69 1037 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 HEMGNQ9BXL5 484 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 TRABDQ9H4I3 376 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 ZDHHC18Q9NUE0 388 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 GRHL1Q9NZI5 618 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 CCDC163A0A0D9SF12 145 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 H3BQ06 376 aaPredicted RBP13.64□□□□□ -0.23
GRIA3-208ENST00000620581 RAD51CO43502 376 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 SEC31AO94979 1220 aaKnown RBP13.64□□□□□ -0.23
GRIA3-208ENST00000620581 CD68P34810 354 aaPredicted RBP13.64□□□□□ -0.23
GRIA3-208ENST00000620581 RPL22P35268 128 aaKnown RBP13.64□□□□□ -0.23
GRIA3-208ENST00000620581 FSTL4Q6MZW2 842 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 LRRC8BQ6P9F7 803 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 TXLNGYQ9BZA5 131 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 HACD3Q9P035 362 aa13.64□□□□□ -0.23
GRIA3-208ENST00000620581 TNRC6BQ9UPQ9 1833 aaKnown RBP13.64□□□□□ -0.23
GRIA3-208ENST00000620581 MYLKQ15746 1914 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 MAGEB16A2A368 324 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 K7EQS6 105 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 PSMD11O00231 422 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 ATG13O75143 517 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 TMCC1O94876 653 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 KAT7O95251 611 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 IL9P15248 144 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 ACVRL1P37023 503 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 GRIA4P48058 902 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 NPY2RP49146 381 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 SARNPP82979 210 aaKnown RBP13.63□□□□□ -0.23
GRIA3-208ENST00000620581 CARD16Q5EG05 197 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 TJAP1Q5JTD0 557 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 ZDHHC20Q5W0Z9 365 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 NLRP9Q7RTR0 991 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 C12orf40Q86WS4 652 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 CNTD1Q8N815 330 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 MCCC1Q96RQ3 725 aaPredicted RBP13.63□□□□□ -0.23
GRIA3-208ENST00000620581 MUC3BQ9H195 1237 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.63□□□□□ -0.23
GRIA3-208ENST00000620581 VPS28Q9UK41 221 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 TP73O15350 636 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 SPAG6O75602 509 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 POP4O95707 220 aaKnown RBP13.63□□□□□ -0.23
GRIA3-208ENST00000620581 MZF1P28698 734 aaPredicted RBP13.63□□□□□ -0.23
GRIA3-208ENST00000620581 ACVR1Q04771 509 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 GRSF1Q12849 480 aaKnown RBP eCLIP13.63□□□□□ -0.23
GRIA3-208ENST00000620581 ZBTB17Q13105 803 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 NAB1Q13506 487 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 RASA2Q15283 850 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 EOGTQ5NDL2 527 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 ZFYVE27Q5T4F4 411 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 STEAP4Q687X5 459 aa13.63□□□□□ -0.23
GRIA3-208ENST00000620581 DSG4Q86SJ6 1040 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms