RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 KLHL32Q96NJ5 620 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 SLC4A5Q9BY07 1137 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 RAVER2Q9HCJ3 691 aaKnown RBP10.51□□□□□ -0.73
VPS11-207ENST00000620429 GPRC5CQ9NQ84 441 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 GIMAP4Q9NUV9 329 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 POLHQ9Y253 713 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 MRPL11Q9Y3B7 192 aaKnown RBP10.51□□□□□ -0.73
VPS11-207ENST00000620429 CEP350Q5VT06 3117 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 TANC1Q9C0D5 1861 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 ERVH48-1M5A8F1 160 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 MAN1A2O60476 641 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 SEC14L2O76054 403 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 KRT8P05787 483 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 CAPN1P07384 714 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 ITGB5P18084 799 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 SNAP47Q5SQN1 464 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 BNC2Q6ZN30 1099 aaPredicted RBP10.51□□□□□ -0.73
VPS11-207ENST00000620429 SV2AQ7L0J3 742 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 MTMR14Q8NCE2 650 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 CDKL2Q92772 493 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 ZNF560Q96MR9 790 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 FEM1BQ9UK73 627 aa10.51□□□□□ -0.73
VPS11-207ENST00000620429 LOC100653049A0A140TA62 436 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 SGK1O00141 431 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 KRT34O76011 436 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 NADKO95544 446 aaPredicted RBP10.5□□□□□ -0.73
VPS11-207ENST00000620429 ASNSP08243 561 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 OR3A3P47888 321 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 RARRES1P49788 294 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 RAD23AP54725 363 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 MS4A2Q01362 244 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 HIF1AQ16665 826 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 FKBP1CQ5VVH2 108 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 MFSD4AQ8N468 514 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 FBXL6Q8N531 539 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 UBR7Q8N806 425 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 MFSD2AQ8NA29 543 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 TMEM174Q8WUU8 243 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 EHMT1Q9H9B1 1298 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 C1orf112Q9NSG2 853 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 PKD2L2Q9NZM6 624 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 ZNF229Q9UJW7 825 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 RBBP6Q7Z6E9 1792 aaKnown RBP10.5□□□□□ -0.73
VPS11-207ENST00000620429 ISPDA4D126 451 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 TMEM150BA6NC51 233 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 ACOT8O14734 319 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 BET1O15155 118 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 TLR3O15455 904 aaKnown RBP10.5□□□□□ -0.73
VPS11-207ENST00000620429 MYCP01106 439 aaPredicted RBP10.5□□□□□ -0.73
VPS11-207ENST00000620429 KRT1P04264 644 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 P4HBP07237 508 aaKnown RBP10.5□□□□□ -0.73
VPS11-207ENST00000620429 MTM1Q13496 603 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 RSBN1Q5VWQ0 802 aaPredicted RBP10.5□□□□□ -0.73
VPS11-207ENST00000620429 DRICH1Q6PGQ1 229 aaPredicted RBP10.5□□□□□ -0.73
VPS11-207ENST00000620429 MFSD7Q6UXD7 560 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 MON1BQ7L1V2 547 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 FAM160B2Q86V87 743 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 CLYBLQ8N0X4 340 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 SLC44A1Q8WWI5 657 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 CLEC4DQ8WXI8 215 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 POMGNT1Q8WZA1 660 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 MARVELD3Q96A59 401 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 ZNF778Q96MU6 729 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 UHRF1Q96T88 793 aaPredicted RBP10.5□□□□□ -0.73
VPS11-207ENST00000620429 TARS2Q9BW92 718 aaKnown RBP10.5□□□□□ -0.73
VPS11-207ENST00000620429 APOL6Q9BWW8 343 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 YTHDF1Q9BYJ9 559 aaKnown RBP10.5□□□□□ -0.73
VPS11-207ENST00000620429 MRPL47Q9HD33 250 aaKnown RBP10.5□□□□□ -0.73
VPS11-207ENST00000620429 C8orf4Q9NR00 106 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 FBXO8Q9NRD0 319 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 PCSK1NQ9UHG2 260 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 NUP50Q9UKX7 468 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 UGT2A1Q9Y4X1 527 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 LOXHD1Q8IVV2 1947 aa10.5□□□□□ -0.73
VPS11-207ENST00000620429 ZNF541Q9H0D2 1346 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 E7ESA3 106 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 NOP56O00567 594 aaKnown RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 ALDH1A2O94788 518 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 BPGMP07738 259 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 ME2P23368 584 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 DSG3P32926 999 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 CBX5P45973 191 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 GBE1Q04446 702 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 GAD2Q05329 585 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 RAD51Q06609 339 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 VAC14Q08AM6 782 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 TRIM32Q13049 653 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 MAMLD1Q13495 774 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 PEX6Q13608 980 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 LDLRAP1Q5SW96 308 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 B3GNT9Q6UX72 402 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 DEPDC4Q8N2C3 294 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 TAB3Q8N5C8 712 aaPredicted RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 PACRGLQ8N7B6 248 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 JPH3Q8WXH2 748 aaPredicted RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 SGCDQ92629 289 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 APBB2Q92870 758 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 GLMNQ92990 594 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 GLT1D1Q96MS3 346 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 KIFC3Q9BVG8 833 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms