RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 CD38P28907 300 aa22.3■■□□□ 1.16
TRAF4-217ENST00000618771 EPHB2P29323 1055 aa22.3■■□□□ 1.16
TRAF4-217ENST00000618771 CCT8P50990 548 aa22.3■■□□□ 1.16
TRAF4-217ENST00000618771 DNA2P51530 1060 aa22.3■■□□□ 1.16
TRAF4-217ENST00000618771 GEMIN4P57678 1058 aaKnown RBP22.3■■□□□ 1.16
TRAF4-217ENST00000618771 TAS2R38P59533 333 aa22.3■■□□□ 1.16
TRAF4-217ENST00000618771 CCDC15Q0P6D6 951 aa22.3■■□□□ 1.16
TRAF4-217ENST00000618771 TRIP6Q15654 476 aaKnown RBP22.3■■□□□ 1.16
TRAF4-217ENST00000618771 PIP5KL1Q5T9C9 394 aa22.3■■□□□ 1.16
TRAF4-217ENST00000618771 PLEKHA7Q6IQ23 1121 aa22.3■■□□□ 1.16
TRAF4-217ENST00000618771 TRIM69Q86WT6 500 aa22.3■■□□□ 1.16
TRAF4-217ENST00000618771 RTL3Q8N8U3 475 aaKnown RBP22.3■■□□□ 1.16
TRAF4-217ENST00000618771 ARRDC3Q96B67 414 aa22.3■■□□□ 1.16
TRAF4-217ENST00000618771 EPAS1Q99814 870 aa22.3■■□□□ 1.16
TRAF4-217ENST00000618771 PREBQ9HCU5 417 aa22.3■■□□□ 1.16
TRAF4-217ENST00000618771 LHX6Q9UPM6 363 aa22.3■■□□□ 1.16
TRAF4-217ENST00000618771 H0Y8X5 98 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 DDX3XO00571 662 aaKnown RBP eCLIP22.29■■□□□ 1.167e-11■■■■■ 53.4
TRAF4-217ENST00000618771 WNT9AO14904 365 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 FLRT2O43155 660 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 CREB3O43889 395 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 CD160O95971 181 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 FTLP02792 175 aaPredicted RBP22.29■■□□□ 1.16
TRAF4-217ENST00000618771 SKILP12757 684 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 PSMA2P25787 234 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 MAT2AP31153 395 aaKnown RBP22.29■■□□□ 1.16
TRAF4-217ENST00000618771 NUDT1P36639 197 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 POLD3Q15054 466 aaPredicted RBP22.29■■□□□ 1.16
TRAF4-217ENST00000618771 ZNF423Q2M1K9 1284 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 SLC45A4Q5BKX6 768 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 CARD16Q5EG05 197 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 ARSIQ5FYB1 569 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 NAPEPLDQ6IQ20 393 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 DNAAF5Q86Y56 855 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 PPP1R16AQ96I34 528 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 PCOLCE2Q9UKZ9 415 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 WASF2Q9Y6W5 498 aa22.29■■□□□ 1.16
TRAF4-217ENST00000618771 A0A1W2PR77 199 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 FAM221BA6H8Z2 402 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 GOLGA6L19H0YKK7 550 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 RNF103O00237 685 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 DFNA5O60443 496 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 CBFA2T3O75081 653 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 LEFTY1O75610 366 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 CCNHP51946 323 aaPredicted RBP22.28■■□□□ 1.16
TRAF4-217ENST00000618771 UBASH3AP57075 661 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 SUZ12Q15022 739 aaKnown RBP22.28■■□□□ 1.16
TRAF4-217ENST00000618771 DBX2Q6ZNG2 339 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 ERN2Q76MJ5 926 aaKnown RBP22.28■■□□□ 1.16
TRAF4-217ENST00000618771 RAB44Q7Z6P3 723 aaPredicted RBP22.28■■□□□ 1.16
TRAF4-217ENST00000618771 ISG20Q96AZ6 181 aaKnown RBP22.28■■□□□ 1.16
TRAF4-217ENST00000618771 HEPHQ9BQS7 1158 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 TM6SF2Q9BZW4 377 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 CATSPERBQ9H7T0 1116 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 ARHGAP20Q9P2F6 1191 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 DMTF1Q9Y222 760 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 ITPR1Q14643 2758 aa22.28■■□□□ 1.16
TRAF4-217ENST00000618771 PCDHGA12O60330 932 aa22.27■■□□□ 1.16
TRAF4-217ENST00000618771 PBX1P40424 430 aa22.27■■□□□ 1.16
TRAF4-217ENST00000618771 ZSCAN23Q3MJ62 389 aa22.27■■□□□ 1.16
TRAF4-217ENST00000618771 SETMARQ53H47 684 aaPredicted RBP22.27■■□□□ 1.16
TRAF4-217ENST00000618771 ZNF354CQ86Y25 554 aa22.27■■□□□ 1.16
TRAF4-217ENST00000618771 ZNF653Q96CK0 615 aa22.27■■□□□ 1.16
TRAF4-217ENST00000618771 HDAC8Q9BY41 377 aa22.27■■□□□ 1.16
TRAF4-217ENST00000618771 NOL6Q9H6R4 1146 aaKnown RBP22.27■■□□□ 1.16
TRAF4-217ENST00000618771 CNOT8Q9UFF9 292 aaKnown RBP22.27■■□□□ 1.16
TRAF4-217ENST00000618771 A0A1W2PQJ5 194 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 TMEM191CA6NGB0 347 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 ZSCAN5CA6NGD5 496 aaPredicted RBP22.26■■□□□ 1.15
TRAF4-217ENST00000618771 TAF4O00268 1085 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 KDELR3O43731 214 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 RNGTTO60942 597 aaKnown RBP22.26■■□□□ 1.15
TRAF4-217ENST00000618771 TPI1P60174 286 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 TDRD12Q587J7 1177 aaKnown RBP22.26■■□□□ 1.15
TRAF4-217ENST00000618771 NEK5Q6P3R8 708 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 GLRX5Q86SX6 157 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 PLPP6Q8IY26 295 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 RYBPQ8N488 228 aaPredicted RBP22.26■■□□□ 1.15
TRAF4-217ENST00000618771 RHBDD1Q8TEB9 315 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 FNIP1Q8TF40 1166 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 TRIM11Q96F44 468 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 ZDHHC6Q9H6R6 413 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 GDF3Q9NR23 364 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 GPATCH2LQ9NWQ4 482 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 LAMA5O15230 3695 aa22.26■■□□□ 1.15
TRAF4-217ENST00000618771 TDRD6O60522 2096 aaKnown RBP22.26■■□□□ 1.15
TRAF4-217ENST00000618771 PTPRBP23467 1997 aa22.25■■□□□ 1.15
TRAF4-217ENST00000618771 A0A1B0GTQ1 180 aa22.25■■□□□ 1.15
TRAF4-217ENST00000618771 A0A1W2PQU0 124 aa22.25■■□□□ 1.15
TRAF4-217ENST00000618771 WASH4PA8MWX3 477 aa22.25■■□□□ 1.15
TRAF4-217ENST00000618771 TLR4O00206 839 aa22.25■■□□□ 1.15
TRAF4-217ENST00000618771 FGF10O15520 208 aaPredicted RBP22.25■■□□□ 1.15
TRAF4-217ENST00000618771 ITGB7P26010 798 aa22.25■■□□□ 1.15
TRAF4-217ENST00000618771 NEK3P51956 506 aa22.25■■□□□ 1.15
TRAF4-217ENST00000618771 YBEYP58557 167 aaPredicted RBP22.25■■□□□ 1.15
TRAF4-217ENST00000618771 IL9RQ01113 521 aa22.25■■□□□ 1.15
TRAF4-217ENST00000618771 PRAMEF14Q5SWL7 426 aa22.25■■□□□ 1.15
TRAF4-217ENST00000618771 LEKR1Q6ZMV7 388 aa22.25■■□□□ 1.15
TRAF4-217ENST00000618771 PNPLA1Q8N8W4 532 aa22.25■■□□□ 1.15
TRAF4-217ENST00000618771 MFSD2AQ8NA29 543 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms