RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.68□□□□□ -1.66
SNCA-213ENST00000618500 EDEM3Q9BZQ6 932 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 CLPBQ9H078 707 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 DNAJC28Q9NX36 388 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 FOXJ2Q9P0K8 574 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 APOBEC3BQ9UH17 382 aaKnown RBP4.68□□□□□ -1.66
SNCA-213ENST00000618500 IL36AQ9UHA7 158 aa4.68□□□□□ -1.66
SNCA-213ENST00000618500 TNFRSF10CO14798 259 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 EXOC3O60645 756 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 CLDN11O75508 207 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 CNTN5O94779 1100 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 KIF20AO95235 890 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 DLGAP3O95886 979 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 APOEP02649 317 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 RPLP0P05388 317 aaKnown RBP4.67□□□□□ -1.66
SNCA-213ENST00000618500 PTGER4P35408 488 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 CDH4P55283 916 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 SEPT6Q14141 434 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 TSR1Q2NL82 804 aaKnown RBP4.67□□□□□ -1.66
SNCA-213ENST00000618500 GOLGA7BQ2TAP0 167 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 TMEM52BQ4KMG9 183 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 PRAMEF14Q5SWL7 426 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 PTAR1Q7Z6K3 402 aaPredicted RBP4.67□□□□□ -1.66
SNCA-213ENST00000618500 HEATR4Q86WZ0 1026 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 APCDD1Q8J025 514 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 CARNMT1Q8N4J0 409 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 OR4D9Q8NGE8 314 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 OR2A12Q8NGT7 310 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 LMX1AQ8TE12 382 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 BHMTQ93088 406 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 NOX5Q96PH1 765 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 ZMYND15Q9H091 742 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 USP25Q9UHP3 1055 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 PCDHGA9Q9Y5G4 932 aaKnown RBP4.67□□□□□ -1.66
SNCA-213ENST00000618500 SDK2Q58EX2 2172 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 FAM47DPA6NHR8 397 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 YJEFN3A6XGL0 299 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 E7ENQ6 273 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 F5H5T6 163 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 O00370 1275 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 CALUO43852 315 aaPredicted RBP4.67□□□□□ -1.66
SNCA-213ENST00000618500 RASGRP1O95267 797 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 SRCP12931 536 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 ADRB3P13945 408 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 TBXAS1P24557 533 aaPredicted RBP4.67□□□□□ -1.66
SNCA-213ENST00000618500 CYP2J2P51589 502 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 VAMP7P51809 220 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 ADIGQ0VDE8 80 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 SLC39A14Q15043 492 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 ZNF683Q8IZ20 524 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 CCAR2Q8N163 923 aaKnown RBP4.67□□□□□ -1.66
SNCA-213ENST00000618500 SIX6OS1Q8N1H7 587 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 DQX1Q8TE96 717 aaKnown RBP4.67□□□□□ -1.66
SNCA-213ENST00000618500 JAKMIP2Q96AA8 810 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 CCDC127Q96BQ5 260 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 FEM1CQ96JP0 617 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 SLC2A13Q96QE2 648 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 CALN1Q9BXU9 219 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 ASPSCR1Q9BZE9 553 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 SLC13A1Q9BZW2 595 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 LRRC4Q9HBW1 653 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 MLXIPLQ9NP71 852 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 DYRK4Q9NR20 520 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 CISHQ9NSE2 258 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 RRN3Q9NYV6 651 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 KLF15Q9UIH9 416 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 NUDT5Q9UKK9 219 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 CNTN6Q9UQ52 1028 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 ENTPD4Q9Y227 616 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 TNRC6AQ8NDV7 1962 aaKnown RBP4.67□□□□□ -1.66
SNCA-213ENST00000618500 NUMA1Q14980 2115 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 ATMQ13315 3056 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 IGLV3-10A0A075B6K4 115 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 DRGXA6NNA5 263 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 YY2O15391 372 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 MAP3K7O43318 606 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 RAD1O60671 282 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 LRCH4O75427 683 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 FYNP06241 537 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 ETV5P41161 510 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 NRG1Q02297 640 aaPredicted RBP4.67□□□□□ -1.66
SNCA-213ENST00000618500 NFATC4Q14934 902 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 IGFBP7Q16270 282 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 EDRF1Q3B7T1 1238 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 C14orf28Q4W4Y0 310 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 COBLL1Q53SF7 1204 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 C22orf39Q6P5X5 142 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 B3GNT8Q7Z7M8 397 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 ZFAND4Q86XD8 727 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 JAMLQ86YT9 394 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 BMPERQ8N8U9 685 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.67□□□□□ -1.66
SNCA-213ENST00000618500 CASKIN2Q8WXE0 1202 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 MYEOVQ96EZ4 313 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 FEM1AQ9BSK4 669 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 SLC29A3Q9BZD2 475 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 INTS2Q9H0H0 1204 aaKnown RBP4.67□□□□□ -1.66
SNCA-213ENST00000618500 MTG2Q9H4K7 406 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 FBXO8Q9NRD0 319 aa4.67□□□□□ -1.66
SNCA-213ENST00000618500 HESX1Q9UBX0 185 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms