RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 NKD2Q969F2 451 aaPredicted RBP11.73□□□□□ -0.53
TP53-222ENST00000617185 VPS33AQ96AX1 596 aa11.73□□□□□ -0.53
TP53-222ENST00000617185 NRBF2Q96F24 287 aa11.73□□□□□ -0.53
TP53-222ENST00000617185 ZBTB45Q96K62 511 aaPredicted RBP11.73□□□□□ -0.53
TP53-222ENST00000617185 GLT1D1Q96MS3 346 aa11.73□□□□□ -0.53
TP53-222ENST00000617185 FAM213AQ9BRX8 229 aa11.73□□□□□ -0.53
TP53-222ENST00000617185 KCND2Q9NZV8 630 aa11.73□□□□□ -0.53
TP53-222ENST00000617185 SLC9A2Q9UBY0 812 aa11.73□□□□□ -0.53
TP53-222ENST00000617185 AFG3L2Q9Y4W6 797 aa11.73□□□□□ -0.53
TP53-222ENST00000617185 CPNE6O95741 557 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 NTRK1P04629 796 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 GNAO1P09471 354 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 ACOT2P49753 483 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 TAS2R40P59535 323 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 BFSP2Q13515 415 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 SELPLGQ14242 412 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 DLG2Q15700 870 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 MBLAC2Q68D91 279 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 APOBEC3FQ8IUX4 373 aaKnown RBP11.72□□□□□ -0.53
TP53-222ENST00000617185 PARP8Q8N3A8 854 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 RNF148Q8N7C7 305 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 TAS1R2Q8TE23 839 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 USP13Q92995 863 aaPredicted RBP11.72□□□□□ -0.53
TP53-222ENST00000617185 SNX18Q96RF0 628 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 TMEM206Q9H813 350 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 ENPP5Q9UJA9 477 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 ZNF112Q9UJU3 913 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 RFPL2O75678 378 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 ATF7P17544 494 aaPredicted RBP11.72□□□□□ -0.53
TP53-222ENST00000617185 MX2P20592 715 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 ELK3P41970 407 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 JAK3P52333 1124 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 GTF2BQ00403 316 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 NEK5Q6P3R8 708 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 IDO2Q6ZQW0 420 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 NIPA1Q7RTP0 329 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 SNX29P2Q8IUI4 249 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 RCOR2Q8IZ40 523 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 NDUFAF2Q8N183 169 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 ZCCHC7Q8N3Z6 543 aaKnown RBP11.72□□□□□ -0.53
TP53-222ENST00000617185 PPM1NQ8N819 430 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 MFSD2AQ8NA29 543 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 BRSK1Q8TDC3 778 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 BEGAINQ9BUH8 593 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.72□□□□□ -0.53
TP53-222ENST00000617185 PNPOQ9NVS9 261 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 SMOXQ9NWM0 555 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 COPG2Q9UBF2 871 aa11.72□□□□□ -0.53
TP53-222ENST00000617185 BRCA1P38398 1863 aaKnown RBP11.71□□□□□ -0.53
TP53-222ENST00000617185 FADS2P1A8MWK0 482 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 KBTBD13C9JR72 458 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 ZNF195O14628 629 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 B4GALT4O60513 344 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 PKLRP30613 574 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 FCHO2Q0JRZ9 810 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 TRIM32Q13049 653 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 MTM1Q13496 603 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 AASDHQ4L235 1098 aaPredicted RBP11.71□□□□□ -0.53
TP53-222ENST00000617185 ZBTB41Q5SVQ8 909 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 CYP4A22Q5TCH4 519 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 VWA5B1Q5TIE3 1220 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 ABRAXAS1Q6UWZ7 409 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 SNX32Q86XE0 403 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 PACRGLQ8N7B6 248 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 RP9Q8TA86 221 aaKnown RBP11.71□□□□□ -0.53
TP53-222ENST00000617185 ZSCAN18Q8TBC5 510 aaPredicted RBP11.71□□□□□ -0.53
TP53-222ENST00000617185 TTC9Q92623 222 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 VMP1Q96GC9 406 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 YTHDF1Q9BYJ9 559 aaKnown RBP11.71□□□□□ -0.53
TP53-222ENST00000617185 POLR3FQ9H1D9 316 aaPredicted RBP11.71□□□□□ -0.53
TP53-222ENST00000617185 GIMAP4Q9NUV9 329 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 RAB20Q9NX57 234 aa11.71□□□□□ -0.53
TP53-222ENST00000617185 XPO7Q9UIA9 1087 aaKnown RBP11.71□□□□□ -0.53
TP53-222ENST00000617185 EIF3LQ9Y262 564 aaKnown RBP11.71□□□□□ -0.53
TP53-222ENST00000617185 GPR25O00155 361 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 POLR1CO15160 346 aaPredicted RBP11.71□□□□□ -0.54
TP53-222ENST00000617185 SEC14L2O76054 403 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 ENO3P13929 434 aaPredicted RBP11.71□□□□□ -0.54
TP53-222ENST00000617185 IL32P24001 234 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 RHDQ02161 417 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 STILQ15468 1287 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 CARTPTQ16568 116 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 LY6KQ17RY6 165 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 ZFYVE27Q5T4F4 411 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 RSBN1Q5VWQ0 802 aaPredicted RBP11.71□□□□□ -0.54
TP53-222ENST00000617185 SLC9A4Q6AI14 798 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 ZCCHC8Q6NZY4 707 aaKnown RBP11.71□□□□□ -0.54
TP53-222ENST00000617185 POLNQ7Z5Q5 900 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 MCOLN2Q8IZK6 566 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 KCTD17Q8N5Z5 321 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 UHRF1Q96T88 793 aaPredicted RBP11.71□□□□□ -0.54
TP53-222ENST00000617185 ADI1Q9BV57 179 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 NOL11Q9H8H0 719 aaKnown RBP11.71□□□□□ -0.54
TP53-222ENST00000617185 WDR41Q9HAD4 459 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 WDR6Q9NNW5 1121 aaKnown RBP11.71□□□□□ -0.54
TP53-222ENST00000617185 RNF181Q9P0P0 153 aa11.71□□□□□ -0.54
TP53-222ENST00000617185 UBA2Q9UBT2 640 aaPredicted RBP11.71□□□□□ -0.54
TP53-222ENST00000617185 MTSS1O43312 755 aa11.7□□□□□ -0.54
TP53-222ENST00000617185 SERPINE1P05121 402 aa11.7□□□□□ -0.54
TP53-222ENST00000617185 FGF3P11487 239 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms