RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 RAPH1Q70E73 1250 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 GAREM2Q75VX8 874 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 BEND5Q7L4P6 421 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 SRLQ86TD4 932 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 TMEM150AQ86TG1 271 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 KCNMB4Q86W47 210 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 PLD6Q8N2A8 252 aaKnown RBP3.49□□□□□ -1.85
LIG4-205ENST00000614526 DCLK2Q8N568 766 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 AGR3Q8TD06 166 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 CENPTQ96BT3 561 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 LRRC39Q96DD0 335 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 SGSM3Q96HU1 749 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 MRGPRX2Q96LB1 330 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 MAGEB18Q96M61 343 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 IL12RB2Q99665 862 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 C17orf80Q9BSJ5 609 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 APOL5Q9BWW9 433 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 SEZ6LQ9BYH1 1024 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 FRMD8Q9BZ67 464 aaPredicted RBP3.49□□□□□ -1.85
LIG4-205ENST00000614526 ATP13A1Q9HD20 1204 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 CASS4Q9NQ75 786 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 TMEM248Q9NWD8 314 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 CHKBQ9Y259 395 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 AAR2Q9Y312 384 aaKnown RBP3.49□□□□□ -1.85
LIG4-205ENST00000614526 PCDHGC4Q9Y5F7 938 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 BACE2Q9Y5Z0 518 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 REV3LO60673 3130 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 A0A0G2JND7 137 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 K7ERQ8 282 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SNX3O60493 162 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 ARHGEF15O94989 841 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 PARNO95453 639 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 PEX11BO96011 259 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 MT-CO1P00395 513 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 C1RP00736 705 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 LRG1P02750 347 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 C8AP07357 584 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 RHOCP08134 193 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 ZDHHC11BP0C7U3 371 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 PRSS56P0CW18 603 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 MLNP12872 115 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 DNAJB1P25685 340 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 WEE1P30291 646 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 HOXC13P31276 330 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 IRS1P35568 1242 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SERPINB4P48594 390 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 C1QTNF8P60827 252 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 GNA12Q03113 381 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 ZNF177Q13360 481 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 PDE1CQ14123 709 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 LBRQ14739 615 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 CHI3L2Q15782 390 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 ZNF789Q5FWF6 425 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 DENND5AQ6IQ26 1287 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 FSTL4Q6MZW2 842 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SPATA21Q7Z572 469 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 UMODL1-AS1Q8N2C9 162 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 MICALL1Q8N3F8 863 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 DNAJC5GQ8N7S2 189 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 GPATCH11Q8N954 259 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 WFDC5Q8TCV5 224 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 DDI1Q8WTU0 396 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 DPF3Q92784 378 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 RMDN1Q96DB5 314 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 TCEAL4Q96EI5 215 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SGF29Q96ES7 293 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 APOPT1Q96IL0 206 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 RPL10LQ96L21 214 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 RMDN2Q96LZ7 410 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 NSMCE3Q96MG7 304 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 TSGA13Q96PP4 275 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 FCRL5Q96RD9 977 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 VAT1Q99536 393 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 NDNQ99608 321 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SHCBP1LQ9BZQ2 653 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 TM6SF2Q9BZW4 377 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 MANSC1Q9H8J5 431 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 FBXO6Q9NRD1 293 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 CLEC4EQ9ULY5 219 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SMG5Q9UPR3 1016 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 MTF2Q9Y483 593 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 PTPRDP23468 1912 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 FNDC1Q4ZHG4 1894 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 MYO16Q9Y6X6 1858 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 MYO1CO00159 1063 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 PRPF4O43172 522 aaKnown RBP eCLIP3.48□□□□□ -1.852e-6■■■■□ 20.6
LIG4-205ENST00000614526 LYPLA1O75608 230 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 ANXA9O76027 345 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 IGLV3-27P01718 113 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 PDHA1P08559 390 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SLC8A1P32418 973 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 GEMP55040 296 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 OXCT1P55809 520 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SMARCB1Q12824 385 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 MPP3Q13368 585 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SERINC3Q13530 473 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 RAB33AQ14088 237 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 HNRNPDQ14103 355 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 GRM3Q14832 879 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms