RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	SEL1L3	Q68CR1	1132 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	KYAT3	Q6YP21	454 aa	Known RBP	11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	GCNT7	Q6ZNI0	430 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	FAM131B	Q86XD5	332 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	SLC22A18AS	Q8N1D0	253 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	FAM181A	Q8N9Y4	354 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	OR13H1	Q8NG92	308 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	GRIN3A	Q8TCU5	1115 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	ASB12	Q8WXK4	309 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	CPA5	Q8WXQ8	436 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	CENPI	Q92674	756 aa	Predicted RBP	11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	VOPP1	Q96AW1	172 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	LENG8	Q96PV6	779 aa	Predicted RBP	11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	HEPH	Q9BQS7	1158 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	SLC17A9	Q9BYT1	436 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	OSBPL2	Q9H1P3	480 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	GAN	Q9H2C0	597 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	TNKS2	Q9H2K2	1166 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	USP29	Q9HBJ7	922 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	ATP13A1	Q9HD20	1204 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	CHMP5	Q9NZZ3	219 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	OR12D3	Q9UGF7	316 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	CLCA2	Q9UQC9	943 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	DAAM1	Q9Y4D1	1078 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	FADS3	Q9Y5Q0	445 aa		11.35	□□□□□ -0.59
CBWD1-222	ENST00000613508	C2CD4B	A6NLJ0	364 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	GOLGA8S	H3BPF8	625 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	LZTS3	O60299	673 aa	Predicted RBP	11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	PIAS2	O75928	621 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	PCDH8	O95206	1070 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	CYP1A1	P04798	512 aa	Predicted RBP	11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	GP1BA	P07359	652 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	RHOQ	P17081	205 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	PTPN9	P43378	593 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	CCNH	P51946	323 aa	Predicted RBP	11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	JAM2	P57087	298 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	CDR2	Q01850	454 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	HSP90AA4P	Q58FG1	418 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	CARD16	Q5EG05	197 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	CDCP2	Q5VXM1	449 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	TRIM72	Q6ZMU5	477 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	STRADA	Q7RTN6	431 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	NLRP14	Q86W24	1093 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	KLK6	Q92876	244 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	RAB7B	Q96AH8	199 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	FEM1C	Q96JP0	617 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	BMF	Q96LC9	184 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	SPON2	Q9BUD6	331 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	C1QTNF2	Q9BXJ5	285 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	FZD3	Q9NPG1	666 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	SAMSN1	Q9NSI8	373 aa	Known RBP	11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	UCKL1	Q9NWZ5	548 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	NLGN3	Q9NZ94	848 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	NEU3	Q9UQ49	428 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	CSNK1G3	Q9Y6M4	447 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	DOCK9	Q9BZ29	2069 aa		11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	HELZ2	Q9BYK8	2649 aa	Known RBP	11.34	□□□□□ -0.59
CBWD1-222	ENST00000613508	SPTY2D1-AS1	A0A0U1RR47	76 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	NEMP2	A6NFY4	417 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	SCAMP1	O15126	338 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	TSPAN6	O43657	245 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	TLX3	O43711	291 aa	Predicted RBP	11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	ALPPL2	P10696	532 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	NME1	P15531	152 aa	Known RBP	11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	CHRNB2	P17787	502 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	SDC4	P31431	198 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	ABCG1	P45844	678 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	GSC	P56915	257 aa	Predicted RBP	11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	CLDN2	P57739	230 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	ATP11A	P98196	1134 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	SEMG2	Q02383	582 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	PTP4A2	Q12974	167 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	FGL2	Q14314	439 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	FZD2	Q14332	565 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	ARL13B	Q3SXY8	428 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	CCDC14	Q49A88	953 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	HS1BP3	Q53T59	392 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	CDKAL1	Q5VV42	579 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508		Q6ZSR6	202 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	DRC7	Q8IY82	874 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	EMC1	Q8N766	993 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	DENND6B	Q8NEG7	585 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	ENOX1	Q8TC92	643 aa	Known RBP	11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	SLC20A1	Q8WUM9	679 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	ARHGEF2	Q92974	986 aa	Known RBP	11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	BBC3	Q96PG8	261 aa	Predicted RBP	11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	KLF6	Q99612	283 aa	Predicted RBP	11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	MYOC	Q99972	504 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	DUSP23	Q9BVJ7	150 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	CALN1	Q9BXU9	219 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	NUP62CL	Q9H1M0	184 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	MAGEH1	Q9H213	219 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	METTL5	Q9NRN9	209 aa	Known RBP	11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	TMEM248	Q9NWD8	314 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	NCKIPSD	Q9NZQ3	722 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	AK5	Q9Y6K8	562 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	CHD5	Q8TDI0	1954 aa		11.33	□□□□□ -0.6
CBWD1-222	ENST00000613508	LY6G6E	A0A0G2JKS1	128 aa		11.32	□□□□□ -0.6
CBWD1-222	ENST00000613508	POM121B	A6NF01	834 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms