RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 MAD1L1Q9Y6D9 718 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 TCRBV9S1A1TA0A576 114 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 ILVBLA1L0T0 632 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 A6NNZ2 444 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 SOBPA7XYQ1 873 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 POC1B-GALNT4F8VUJ3 575 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 XYLBO75191 536 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 HLA-DQB2P05538 268 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 DDX6P26196 483 aaKnown RBP eCLIP9.07□□□□□ -0.96
CCDC47-207ENST00000612558 GCAP28676 217 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 HPDP32754 393 aaPredicted RBP9.07□□□□□ -0.96
CCDC47-207ENST00000612558 STX2P32856 288 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 ACVRL1P37023 503 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 NPY2RP49146 381 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 GEMP55040 296 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 PPP2R2AP63151 447 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 ZXDBP98169 803 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 GNA12Q03113 381 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 NR1H3Q13133 447 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 SPARCL1Q14515 664 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 AGERQ15109 404 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 TERF2Q15554 542 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 TUBB8Q3ZCM7 444 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 HTR3DQ70Z44 454 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 CYS1Q717R9 158 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 TAOK1Q7L7X3 1001 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 LINC00523Q86TU6 105 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 FAM217AQ8IXS0 508 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 MPP5Q8N3R9 675 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 TEX26Q8N6G2 289 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 LEMD2Q8NC56 503 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 OR52K1Q8NGK4 314 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 PABPC5Q96DU9 382 aaKnown RBP9.07□□□□□ -0.96
CCDC47-207ENST00000612558 STAMBPL1Q96FJ0 436 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 CFAP36Q96G28 342 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 OXNAD1Q96HP4 312 aaPredicted RBP9.07□□□□□ -0.96
CCDC47-207ENST00000612558 ZNF419Q96HQ0 510 aaPredicted RBP9.07□□□□□ -0.96
CCDC47-207ENST00000612558 XPO6Q96QU8 1125 aaKnown RBP9.07□□□□□ -0.96
CCDC47-207ENST00000612558 SLC46A2Q9BY10 475 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 SLC25A51Q9H1U9 297 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 CASS4Q9NQ75 786 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 PSD3Q9NYI0 1048 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 EURLQ9NYK6 297 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 BFARQ9NZS9 450 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 TBC1D30Q9Y2I9 924 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 SH3BP1Q9Y3L3 701 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 TTLL3Q9Y4R7 772 aa9.07□□□□□ -0.96
CCDC47-207ENST00000612558 A0A0D9SEW6 157 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 MAGEB16A2A368 324 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 TYW5A2RUC4 315 aaKnown RBP9.06□□□□□ -0.96
CCDC47-207ENST00000612558 GFRA2O00451 464 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 TSPAN3O60637 253 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 PRAMEF11O60813 436 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 RFPL2O75678 378 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 RHOCP08134 193 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 EPCAMP16422 314 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 GJA1P17302 382 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 MGAT1P26572 445 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 ETFBP38117 255 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 CCR2P41597 374 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 MSH2P43246 934 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 SESN2P58004 480 aaPredicted RBP9.06□□□□□ -0.96
CCDC47-207ENST00000612558 SLC10A7Q0GE19 358 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 CDH17Q12864 832 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 MPP3Q13368 585 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 LBRQ14739 615 aaKnown RBP9.06□□□□□ -0.96
CCDC47-207ENST00000612558 ARHGAP15Q53QZ3 475 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 TMCO4Q5TGY1 634 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 CASC4Q6P4E1 433 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 ELMSAN1Q6PJG2 1045 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 ZNF783Q6ZMS7 281 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 UNC5AQ6ZN44 842 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 DNAAF3Q8N9W5 541 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 HJURPQ8NCD3 748 aaPredicted RBP9.06□□□□□ -0.96
CCDC47-207ENST00000612558 SPATA22Q8NHS9 363 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 GSDMBQ8TAX9 411 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 SHKBP1Q8TBC3 707 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 ARNTL2Q8WYA1 636 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 TMA16Q96EY4 203 aaKnown RBP9.06□□□□□ -0.96
CCDC47-207ENST00000612558 ZNF599Q96NL3 588 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 DHRS4Q9BTZ2 278 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 CNOT10Q9H9A5 744 aaKnown RBP9.06□□□□□ -0.96
CCDC47-207ENST00000612558 VPS45Q9NRW7 570 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 HAUS2Q9NVX0 235 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 HCFC1R1Q9NWW0 138 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 ZDHHC7Q9NXF8 308 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 UBP1Q9NZI7 540 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 CFAP97Q9P2B7 532 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 DNMT3BQ9UBC3 853 aaKnown RBP9.06□□□□□ -0.96
CCDC47-207ENST00000612558 CTNNAL1Q9UBT7 734 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 TBK1Q9UHD2 729 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 ARHGAP26Q9UNA1 814 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 GBF1Q92538 1859 aa9.06□□□□□ -0.96
CCDC47-207ENST00000612558 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.05□□□□□ -0.96
CCDC47-207ENST00000612558 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.05□□□□□ -0.96
CCDC47-207ENST00000612558 LEFTY2O00292 366 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 PER2O15055 1255 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 KDELR3O43731 214 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 TBL1XO60907 577 aa9.05□□□□□ -0.96
CCDC47-207ENST00000612558 USP12O75317 370 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms