RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 TP53INP2Q8IXH6 220 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 LINC01465Q8N7H1 131 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 SCAMP5Q8TAC9 235 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 KHSRPQ92945 711 aaKnown RBP eCLIP6.46□□□□□ -1.381e-6■■■■□ 21.4
SNX13-213ENST00000611725 CATSPER2Q96P56 530 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 AGAP2Q99490 1192 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 POLR1EQ9GZS1 481 aaKnown RBP6.46□□□□□ -1.38
SNX13-213ENST00000611725 GBA3Q9H227 469 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 LNPEPQ9UIQ6 1025 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 VWA7Q9Y334 891 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 BTAF1O14981 1849 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 SF3B1O75533 1304 aaKnown RBP eCLIP6.46□□□□□ -1.385e-6■■■■■ 70.3
SNX13-213ENST00000611725 BCORQ6W2J9 1755 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 VPS26AO75436 327 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 SRP72O76094 671 aaKnown RBP6.46□□□□□ -1.38
SNX13-213ENST00000611725 ASGR1P07306 291 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 CCDC166P0CW27 439 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 T-ENOLP0DO92 83 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 HNRNPLP14866 589 aaKnown RBP eCLIP6.46□□□□□ -1.382e-7■□□□□ 10
SNX13-213ENST00000611725 GALNT2Q10471 571 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 PKDCCQ504Y2 493 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 TIFABQ6ZNK6 161 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 FSTL5Q8N475 847 aaPredicted RBP6.46□□□□□ -1.38
SNX13-213ENST00000611725 ARRDC4Q8NCT1 418 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 RP9Q8TA86 221 aaKnown RBP6.46□□□□□ -1.38
SNX13-213ENST00000611725 ULK4Q96C45 1275 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 EGFL8Q99944 293 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 AURKCQ9UQB9 309 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 ARAP2Q8WZ64 1704 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 A0A0U1RQF3 1178 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 ARL5CA6NH57 179 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 FAM72CH0Y354 149 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 NOL3O60936 208 aaKnown RBP6.46□□□□□ -1.38
SNX13-213ENST00000611725 ALDH1A1P00352 501 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 LTA4HP09960 611 aaKnown RBP6.46□□□□□ -1.38
SNX13-213ENST00000611725 RAG1P15918 1043 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 CLCN5P51795 746 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 PKNOX1P55347 436 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 ESRRGP62508 458 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 FAM72AQ5TYM5 149 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 LIPMQ5VYY2 423 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 ANKS6Q68DC2 871 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 FAM72DQ6L9T8 149 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 RFWD3Q6PCD5 774 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 AAGABQ6PD74 315 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 LCA5Q86VQ0 697 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 FAM72BQ86X60 149 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 TRMOQ9BU70 441 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 ATP13A1Q9HD20 1204 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 STARD7Q9NQZ5 370 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 TRPM5Q9NZQ8 1165 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 Q9Y3F1 56 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 SHANK3Q9BYB0 1731 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 KIAA1551Q9HCM1 1747 aa6.46□□□□□ -1.38
SNX13-213ENST00000611725 PSMD12O00232 456 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 CBX4O00257 560 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 MRASO14807 208 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 SOAT2O75908 522 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 BEST1O76090 585 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 TYMPP19971 482 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CCNFP41002 786 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CHRNA4P43681 627 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 ZBTB6Q15916 424 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 EFL1Q7Z2Z2 1120 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 SLC22A9Q8IVM8 553 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 GALNT4Q8N4A0 578 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 SDCCAG3Q96C92 435 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 FCRL5Q96RD9 977 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 MIPEPQ99797 713 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 MRPL57Q9BQC6 102 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 WDR83Q9BRX9 315 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 ZYG11BQ9C0D3 744 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CDH19Q9H159 772 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 WDR41Q9HAD4 459 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 UXTQ9UBK9 157 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 MAP1BP46821 2468 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 MPSTP25325 297 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 GJA5P36382 358 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CD86P42081 329 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CDH13P55290 713 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 POU4F1Q01851 419 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 POLD3Q15054 466 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 KIAA0930Q6ICG6 404 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 ESRP1Q6NXG1 681 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 TMEM135Q86UB9 458 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 RTL3Q8N8U3 475 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 WDR60Q8WVS4 1066 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 PBXIP1Q96AQ6 731 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CCDC97Q96F63 343 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 UROC1Q96N76 676 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 ZBTB18Q99592 522 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 ALG9Q9H6U8 611 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 TLE6Q9H808 572 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 LRRC42Q9Y546 428 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 SNX10Q9Y5X0 201 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 DDX60LQ5H9U9 1706 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 ATP6AP2A0A1C7CYW4 349 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 LIN7AO14910 233 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 MATN3O15232 486 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms