RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 PRRT2Q7Z6L0 340 aaPredicted RBP12.11□□□□□ -0.47
TP53-220ENST00000610623 CPNE9Q8IYJ1 553 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 MPP5Q8N3R9 675 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 ZSCAN18Q8TBC5 510 aaPredicted RBP12.11□□□□□ -0.47
TP53-220ENST00000610623 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.11□□□□□ -0.47
TP53-220ENST00000610623 NSMCE3Q96MG7 304 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 POLR3FQ9H1D9 316 aaPredicted RBP12.11□□□□□ -0.47
TP53-220ENST00000610623 C20orf96Q9NUD7 363 aaPredicted RBP12.11□□□□□ -0.47
TP53-220ENST00000610623 CORINQ9Y5Q5 1042 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 CROCCQ5TZA2 2017 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 PTPRJQ12913 1337 aa12.11□□□□□ -0.47
TP53-220ENST00000610623 SLCO1B7G3V0H7 640 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 J3QRK9 145 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 TRIM13O60858 407 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 DDNO94850 711 aaPredicted RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 ALOX5P09917 674 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 TCN1P20061 433 aaPredicted RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 TGM2P21980 687 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 EDNRBP24530 442 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 RBL1P28749 1068 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 GARSP41250 739 aaKnown RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 PCYT1AP49585 367 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 LIG4P49917 911 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 C9orf131Q5VYM1 1079 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 FAM117BQ6P1L5 589 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 GADL1Q6ZQY3 521 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 CHSY3Q70JA7 882 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 ERO1BQ86YB8 467 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 CAMK1DQ8IU85 385 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 SLCO4A1Q96BD0 722 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 FBXL8Q96CD0 374 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 CTRCQ99895 268 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 SPATC1LQ9H0A9 340 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 WDR55Q9H6Y2 383 aaPredicted RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 NOL11Q9H8H0 719 aaKnown RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 SPON1Q9HCB6 807 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 ADA2Q9NZK5 511 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 VTI1BQ9UEU0 232 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 RAP2CQ9Y3L5 183 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 STYXL1Q9Y6J8 313 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 IGKV6D-21A0A0A0MT36 114 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 FAM47E-STBD1D6RA91 191 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 DYNC1LI2O43237 492 aaPredicted RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 SLC25A27O95847 323 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 FGFR3P22607 806 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 RPL14P50914 215 aaKnown RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 CDH6P55285 790 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 WNT7BP56706 349 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 YWHAEP62258 255 aaKnown RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 PRKCQQ04759 706 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 MMRN1Q13201 1228 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 EMC2Q15006 297 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 PDK2Q15119 407 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 TAF5Q15542 800 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 INTS11Q5TA45 600 aaKnown RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 MFSD4BQ5TF39 518 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 SLC9A4Q6AI14 798 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 GPR153Q6NV75 609 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 TMEM26Q6ZUK4 368 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 TRMT1LQ7Z2T5 733 aaKnown RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 UNC5BQ8IZJ1 945 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 PNPT1Q8TCS8 783 aaKnown RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 TMA16Q96EY4 203 aaKnown RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 OTUD5Q96G74 571 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 RNF157Q96PX1 679 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 TCF12Q99081 682 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 CGRRF1Q99675 332 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 NIFKQ9BYG3 293 aaKnown RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 YTHDF1Q9BYJ9 559 aaKnown RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 UNC93B1Q9H1C4 597 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 MRGBPQ9NV56 204 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 ASNSD1Q9NWL6 643 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 AGO2Q9UKV8 859 aaKnown RBP12.1□□□□□ -0.47
TP53-220ENST00000610623 CPQQ9Y646 472 aa12.1□□□□□ -0.47
TP53-220ENST00000610623 TCAF2A6NFQ2 919 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 ADM5C9JUS6 153 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 CLPXO76031 633 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 BCL10O95999 233 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 HSPA1AP0DMV8 641 aaKnown RBP12.09□□□□□ -0.47
TP53-220ENST00000610623 HSPA1BP0DMV9 641 aaKnown RBP12.09□□□□□ -0.47
TP53-220ENST00000610623 TGFB3P10600 412 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 PAX3P23760 479 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 MAP4P27816 1152 aaKnown RBP12.09□□□□□ -0.47
TP53-220ENST00000610623 PSME3P61289 254 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 PSMC1P62191 440 aaKnown RBP12.09□□□□□ -0.47
TP53-220ENST00000610623 SP4Q02446 784 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 TRAF2Q12933 501 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 KCNJ8Q15842 424 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 MTERF2Q49AM1 385 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 PTPN20Q4JDL3 420 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 FAM160B1Q5W0V3 765 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 HMBOX1Q6NT76 420 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 TMEM214Q6NUQ4 689 aaKnown RBP12.09□□□□□ -0.47
TP53-220ENST00000610623 NAPRTQ6XQN6 538 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 CYP2U1Q7Z449 544 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 IGFN1Q86VF2 1251 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 PLD5Q8N7P1 536 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 FAM156AQ8NDB6 213 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 ISL2Q96A47 359 aa12.09□□□□□ -0.47
TP53-220ENST00000610623 ZNF347Q96SE7 839 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms