RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 NOD2Q9HC29 1040 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 ATP13A1Q9HD20 1204 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 TREX1Q9NSU2 369 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 TMEM216Q9P0N5 145 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 TLK1Q9UKI8 766 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 BACE2Q9Y5Z0 518 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 TET1Q8NFU7 2136 aa12.12□□□□□ -0.47
USP6NL-206ENST00000609853 CCDC195A0A1B0GUA6 201 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 TBKBP1A7MCY6 615 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 TMEM114B3SHH9 223 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 RAMP2O60895 175 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 PMPCBO75439 489 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 C2P06681 752 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 RALBP11234 206 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 PBX3P40426 434 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 ARCN1P48444 511 aaKnown RBP12.11□□□□□ -0.47
USP6NL-206ENST00000609853 HARS2P49590 506 aaKnown RBP12.11□□□□□ -0.47
USP6NL-206ENST00000609853 WNT3AP56704 352 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 THOC5Q13769 683 aaKnown RBP12.11□□□□□ -0.47
USP6NL-206ENST00000609853 POLD3Q15054 466 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-206ENST00000609853 USP41Q3LFD5 358 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 PPM1JQ5JR12 505 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 RTP2Q5QGT7 225 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 RASIP1Q5U651 963 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 C16orf46Q6P387 395 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 KLHDC10Q6PID8 442 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 GALNT7Q86SF2 657 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 KIF2BQ8N4N8 673 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 TTC9BQ8N6N2 239 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 OR6Y1Q8NGX8 325 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 PTCD3Q96EY7 689 aaKnown RBP12.11□□□□□ -0.47
USP6NL-206ENST00000609853 HMCESQ96FZ2 354 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 ZNF419Q96HQ0 510 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-206ENST00000609853 NMRAL1Q9HBL8 299 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 SAGE1Q9NXZ1 904 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 IL1RAPL1Q9NZN1 696 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 MTRRQ9UBK8 725 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 BAIAP2L1Q9UHR4 511 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 SLC27A5Q9Y2P5 690 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 SLC38A8A6NNN8 435 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 FCHO1O14526 889 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 TLR5O60602 858 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 PRKCGP05129 697 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 SERPINA6P08185 405 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 CCND1P24385 295 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 CRABP2P29373 138 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 ALDH7A1P49419 539 aaKnown RBP12.11□□□□□ -0.47
USP6NL-206ENST00000609853 SERPINH1P50454 418 aaKnown RBP12.11□□□□□ -0.47
USP6NL-206ENST00000609853 APLP1P51693 650 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 HK2P52789 917 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 AQP5P55064 265 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 DUSP4Q13115 394 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 SERINC3Q13530 473 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 SLC12A1Q13621 1099 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 POU6F1Q14863 301 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 CES4AQ5XG92 561 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 CMC1Q7Z7K0 106 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 MIB1Q86YT6 1006 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 C10orf107Q8IVU9 208 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 LMNTD2Q8IXW0 634 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 FBXO22Q8NEZ5 403 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 SH3TC2Q8TF17 1288 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 ZNF296Q8WUU4 475 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-206ENST00000609853 PEX13Q92968 403 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 AZIN2Q96A70 460 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 TADA1Q96BN2 335 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 RPRD1AQ96P16 312 aaPredicted RBP12.11□□□□□ -0.47
USP6NL-206ENST00000609853 TBC1D10AQ9BXI6 508 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 ZNF212Q9UDV6 495 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 DNMT3LQ9UJW3 386 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 TRIM33Q9UPN9 1127 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 CHD5Q8TDI0 1954 aa12.11□□□□□ -0.47
USP6NL-206ENST00000609853 MICAL3Q7RTP6 2002 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.1□□□□□ -0.47
USP6NL-206ENST00000609853 CARNS1A5YM72 827 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 SNUPNO95149 360 aaKnown RBP12.1□□□□□ -0.47
USP6NL-206ENST00000609853 VAPBO95292 243 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 VNN2O95498 520 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 CBX6O95503 412 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 TBX18O95935 607 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 EFEMP2O95967 443 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 TOP3BO95985 862 aaKnown RBP12.1□□□□□ -0.47
USP6NL-206ENST00000609853 EPOP01588 193 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 ESRRAP11474 423 aaPredicted RBP12.1□□□□□ -0.47
USP6NL-206ENST00000609853 ALOX15P16050 662 aaPredicted RBP12.1□□□□□ -0.47
USP6NL-206ENST00000609853 ATP5C1P36542 298 aaKnown RBP12.1□□□□□ -0.47
USP6NL-206ENST00000609853 GATMP50440 423 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 KPNA2P52292 529 aaKnown RBP12.1□□□□□ -0.47
USP6NL-206ENST00000609853 ABCE1P61221 599 aaKnown RBP12.1□□□□□ -0.47
USP6NL-206ENST00000609853 IRX4P78413 519 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 ASPHQ12797 758 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 USP10Q14694 798 aaKnown RBP12.1□□□□□ -0.47
USP6NL-206ENST00000609853 SLC14A2Q15849 920 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 ALFQ53S48 1182 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 SWT1Q5T5J6 900 aaKnown RBP12.1□□□□□ -0.47
USP6NL-206ENST00000609853 RAP1GAP2Q684P5 730 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 RSPO2Q6UXX9 243 aaPredicted RBP12.1□□□□□ -0.47
USP6NL-206ENST00000609853 ANKRD33Q7Z3H0 272 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 TFAP2DQ7Z6R9 452 aa12.1□□□□□ -0.47
USP6NL-206ENST00000609853 C2CD4AQ8NCU7 369 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms