RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 LMCD1Q9NZU5 365 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 KIAA1522Q9P206 1035 aaPredicted RBP12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PRKAG3Q9UGI9 489 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ADAM21Q9UKJ8 722 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 NOVA2Q9UNW9 492 aaKnown RBP12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ARIH1Q9Y4X5 557 aaPredicted RBP12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 OR51B4Q9Y5P0 310 aa12.48□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CCDC85CA6NKD9 419 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SHOX2O60902 331 aaPredicted RBP12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 AVILO75366 819 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 BANF1O75531 89 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ZMPSTE24O75844 475 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CR2P20023 1033 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 HLA-DPA1P20036 260 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PBX2P40425 430 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MAPK8P45983 427 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SERPINB9P50453 376 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SGSHP51688 502 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DNAJC3Q13217 504 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CRYMQ14894 314 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PCID2Q5JVF3 399 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 LGSNQ5TDP6 509 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 RNF219Q5W0B1 726 aaPredicted RBP12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 RETSATQ6NUM9 610 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MARK2Q7KZI7 788 aaKnown RBP12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 NLRP9Q7RTR0 991 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 OTOP3Q7RTS5 596 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ADGRD2Q7Z7M1 963 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PRPF39Q86UA1 669 aaKnown RBP12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SLC26A11Q86WA9 606 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ZNF354CQ86Y25 554 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MFN1Q8IWA4 741 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 BBS7Q8IWZ6 715 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TDHQ8IZJ6 230 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CELF5Q8N6W0 485 aaKnown RBP12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DNAAF3Q8N9W5 541 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 VN1R2Q8NFZ6 395 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 OR52K1Q8NGK4 314 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ARRDC2Q8TBH0 407 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 USP33Q8TEY7 942 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ALKBH8Q96BT7 664 aaKnown RBP12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MTBPQ96DY7 904 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TCEAL4Q96EI5 215 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ALG14Q96F25 216 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MRGPRX2Q96LB1 330 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PAFAH2Q99487 392 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FEM1AQ9BSK4 669 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CINPQ9BW66 212 aaPredicted RBP12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MUC3BQ9H195 1237 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CENPHQ9H3R5 247 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 NT5MQ9NPB1 228 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 NSMCE4AQ9NXX6 385 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 RIMKLBQ9ULI2 386 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MAD1L1Q9Y6D9 718 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 IKBKGQ9Y6K9 419 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FAM169AQ9Y6X4 670 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CEP290O15078 2479 aa12.47□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 A0A0D9SEW6 157 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 IQANK1A0A1B0GTG1 560 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 LOC285095A0A1B0GVY8 99 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TLDC2A0PJX2 215 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 POLR3GO15318 223 aaPredicted RBP12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PAPSS2O95340 614 aaPredicted RBP12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FGF1P05230 155 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MMP2P08253 660 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SERPINF2P08697 491 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 HOXB8P17481 243 aaPredicted RBP12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CA4P22748 312 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MGAT1P26572 445 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 GRIA1P42261 906 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MSH2P43246 934 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CSNK1DP48730 415 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 WNT3AP56704 352 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MAGOHP61326 146 aaKnown RBP12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CBX1P83916 185 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 STXBP5Q5T5C0 1151 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DENND5AQ6IQ26 1287 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 GRASPQ7Z6J2 395 aaPredicted RBP12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TRABD2AQ86V40 505 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 EFHBQ8N7U6 833 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 OR7D4Q8NG98 312 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 OR52K2Q8NGK3 314 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 GABPB2Q8TAK5 448 aaPredicted RBP12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 UHMK1Q8TAS1 419 aaKnown RBP12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DDI1Q8WTU0 396 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DCAKDQ8WVC6 231 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 E2F7Q96AV8 911 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CENPTQ96BT3 561 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CFAP36Q96G28 342 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 NUDCD1Q96RS6 583 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 C19orf43Q9BQ61 176 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 NSUN3Q9H649 340 aaKnown RBP12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PIDD1Q9HB75 910 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TRPV4Q9HBA0 871 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PLAC1Q9HBJ0 212 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SYBUQ9NX95 663 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 GDE1Q9NZC3 331 aa12.46□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MRPS23Q9Y3D9 190 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms