RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SLIT3O75094 1523 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 CHD4Q14839 1912 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 DCCP43146 1447 aa8.99□□□□□ -0.97
COMMD3-215ENST00000602574 A0A0D9SFI3 127 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 MTMR11A4FU01 709 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 NT5C1B-RDH14C9J2C7 533 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 H0Y626 953 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PPEF1O14829 653 aaPredicted RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 DHFRP00374 187 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 GH1P01241 217 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 FGGP02679 453 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 FABP1P07148 127 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 NFICP08651 508 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PSKH1P11801 424 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 CD44P16070 742 aaKnown RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 IFNAR1P17181 557 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ATP6V1E1P36543 226 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PTENP60484 403 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 CREMQ03060 361 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ZBTB16Q05516 673 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 KCNAB2Q13303 367 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 CCNIQ14094 377 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 HIC1Q14526 733 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ZNF273Q14593 569 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 RPS6KA1Q15418 735 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 SMTNL2Q2TAL5 461 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PERM1Q5SV97 790 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 BRAT1Q6PJG6 821 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 SEZ6L2Q6UXD5 910 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ZNF438Q7Z4V0 828 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 VN1R5Q7Z5H4 357 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 SIX6OS1Q8N1H7 587 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 CRYBG2Q8N1P7 616 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PLD5Q8N7P1 536 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 DDX1Q92499 740 aaKnown RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 RNF170Q96K19 258 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 SERPINB11Q96P15 392 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PPP1R2P1Q96PQ5 205 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ERGIC2Q96RQ1 377 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 OSBPL11Q9BXB4 747 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PIF1Q9H611 641 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ELAC1Q9H777 363 aaKnown RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 CCDC59Q9P031 241 aaKnown RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 CDC14AQ9UNH5 594 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 COPS3Q9UNS2 423 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 GNEQ9Y223 722 aaKnown RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 MAP3K2Q9Y2U5 619 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PLLPQ9Y342 182 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ACTL7AQ9Y615 435 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PFASO15067 1338 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 UBE4BO95155 1302 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PRR23AA6NEV1 266 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 B2RBV5 119 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 SGK1O00141 431 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 MEN1O00255 615 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 AURKAO14965 403 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 USP12O75317 370 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PALMO75781 387 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 DGAT1O75907 488 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 LDOC1O95751 146 aaPredicted RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ERBB2P04626 1255 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 S100A9P06702 114 aaKnown RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ACADMP11310 421 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ARNTP27540 789 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 OPRL1P41146 370 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 WDR4P57081 412 aaKnown RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 SPCS3P61009 180 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 SMAD4Q13485 552 aaKnown RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ZNF827Q17R98 1081 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ASTE1Q2TB18 679 aaPredicted RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 RUNDC3AQ59EK9 446 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 HMBOX1Q6NT76 420 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 TOM1L2Q6ZVM7 507 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 CREB3L2Q70SY1 520 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 OTOAQ7RTW8 1153 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 NEK8Q86SG6 692 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 CDH24Q86UP0 819 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 KBTBD6Q86V97 674 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 SLC22A16Q86VW1 577 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PPM1KQ8N3J5 372 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 CCDC185Q8N715 623 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 TMIEQ8NEW7 156 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 OR5T2Q8NGG2 359 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 URGCPQ8TCY9 931 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 RAB2BQ8WUD1 216 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 GTF2H4Q92759 462 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 FAM227BQ96M60 508 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 FOPNLQ96NB1 174 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PELOQ9BRX2 385 aaKnown RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 CCM2Q9BSQ5 444 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 KATNAL1Q9BW62 490 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 LSM14BQ9BX40 385 aaKnown RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 BRD7Q9NPI1 651 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 PRDM9Q9NQV7 894 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ENAMQ9NRM1 1142 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 KANSL3Q9P2N6 904 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 TAGLN3Q9UI15 199 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 ZNF229Q9UJW7 825 aa8.98□□□□□ -0.97
COMMD3-215ENST00000602574 DBR1Q9UK59 544 aaKnown RBP8.98□□□□□ -0.97
COMMD3-215ENST00000602574 SIPA1L3O60292 1781 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms