RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ITGB7P26010 798 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 L1CAMP32004 1257 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 ACVRL1P37023 503 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 EIF2S3P41091 472 aaKnown RBP13.41□□□□□ -0.26
RPS28-204ENST00000602140 CCNHP51946 323 aaPredicted RBP13.41□□□□□ -0.26
RPS28-204ENST00000602140 RPS21P63220 83 aaKnown RBP13.41□□□□□ -0.26
RPS28-204ENST00000602140 E2F1Q01094 437 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 FGL2Q14314 439 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 CDO1Q16878 200 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 C15orf59Q2T9L4 293 aaPredicted RBP13.41□□□□□ -0.26
RPS28-204ENST00000602140 ZNF542PQ5EBM4 170 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 LRRC69Q6ZNQ3 347 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 Q6ZSR6 202 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 TMC6Q7Z403 805 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 PTAR1Q7Z6K3 402 aaPredicted RBP13.41□□□□□ -0.26
RPS28-204ENST00000602140 PHLDB2Q86SQ0 1253 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 CACTIN-AS1Q8N1I8 211 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 FAM174AQ8TBP5 190 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 SLC20A1Q8WUM9 679 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 FEM1CQ96JP0 617 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 BMFQ96LC9 184 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 SLC17A9Q9BYT1 436 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 TM6SF2Q9BZW4 377 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 NUP62CLQ9H1M0 184 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 ZDHHC6Q9H6R6 413 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 DNAJC28Q9NX36 388 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 TAB2Q9NYJ8 693 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 CHMP5Q9NZZ3 219 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 HECAQ9UBI9 543 aaPredicted RBP13.41□□□□□ -0.26
RPS28-204ENST00000602140 PPARGC1AQ9UBK2 798 aaKnown RBP13.41□□□□□ -0.26
RPS28-204ENST00000602140 OR12D3Q9UGF7 316 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 NOCTQ9UK39 431 aaKnown RBP13.41□□□□□ -0.26
RPS28-204ENST00000602140 FADS3Q9Y5Q0 445 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 HS3ST3A1Q9Y663 406 aa13.41□□□□□ -0.26
RPS28-204ENST00000602140 ARID1BQ8NFD5 2236 aaPredicted RBP13.41□□□□□ -0.26
RPS28-204ENST00000602140 KNTC1P50748 2209 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 SMG1Q96Q15 3661 aaKnown RBP13.4□□□□□ -0.26
RPS28-204ENST00000602140 POM121BA6NF01 834 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 RAD51BO15315 384 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 RRP8O43159 456 aaKnown RBP13.4□□□□□ -0.26
RPS28-204ENST00000602140 GFPT2O94808 682 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 CD160O95971 181 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 MT-CO3P00414 261 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 GIMD1P0DJR0 217 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 ALPPL2P10696 532 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 MYF5P13349 255 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 EEF1GP26641 437 aaKnown RBP13.4□□□□□ -0.26
RPS28-204ENST00000602140 GKP32189 559 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 ADRA1BP35368 520 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 CCDC14Q49A88 953 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 KIAA1161Q6NSJ0 714 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 RWDD4Q6NW29 188 aaKnown RBP13.4□□□□□ -0.26
RPS28-204ENST00000602140 KDM7AQ6ZMT4 941 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 PARS2Q7L3T8 475 aaKnown RBP13.4□□□□□ -0.26
RPS28-204ENST00000602140 ZNF677Q86XU0 584 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 DCP2Q8IU60 420 aaKnown RBP13.4□□□□□ -0.26
RPS28-204ENST00000602140 RYBPQ8N488 228 aaPredicted RBP13.4□□□□□ -0.26
RPS28-204ENST00000602140 DCBLD1Q8N8Z6 715 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 RXFP2Q8WXD0 754 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 IFT43Q96FT9 208 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 VPS16Q9H269 839 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 GANQ9H2C0 597 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 NDFIP2Q9NV92 336 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 MYLKQ15746 1914 aa13.4□□□□□ -0.26
RPS28-204ENST00000602140 FASNP49327 2511 aaKnown RBP13.4□□□□□ -0.26
RPS28-204ENST00000602140 DOCK4Q8N1I0 1966 aa13.4□□□□□ -0.27
RPS28-204ENST00000602140 NEMP2A6NFY4 417 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 EIF4E1BA6NMX2 242 aaKnown RBP13.39□□□□□ -0.27
RPS28-204ENST00000602140 FAM72CH0Y354 149 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 AP1G1O43747 822 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 BRINP1O60477 761 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 GJB6O95452 261 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 CYP1A1P04798 512 aaPredicted RBP13.39□□□□□ -0.27
RPS28-204ENST00000602140 CKMT1AP12532 417 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 CHRNB2P17787 502 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 MMP8P22894 467 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 SDC4P31431 198 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 ETFBP38117 255 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 KLK7P49862 253 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 POLR2FP61218 127 aaKnown RBP13.39□□□□□ -0.27
RPS28-204ENST00000602140 HNRNPKP61978 463 aaKnown RBP eCLIP13.39□□□□□ -0.27
RPS28-204ENST00000602140 FMO1Q01740 532 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 CDR2Q01850 454 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 NRG1Q02297 640 aaPredicted RBP13.39□□□□□ -0.27
RPS28-204ENST00000602140 FZD2Q14332 565 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 ARL13BQ3SXY8 428 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 FAM72AQ5TYM5 149 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 MANEALQ5VSG8 457 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 FAM72DQ6L9T8 149 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 KYAT3Q6YP21 454 aaKnown RBP13.39□□□□□ -0.27
RPS28-204ENST00000602140 NLRP14Q86W24 1093 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 FAM72BQ86X60 149 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 OR6K2Q8NGY2 324 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 JOSD2Q8TAC2 188 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 SLC30A5Q8TAD4 765 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 SNIP1Q8TAD8 396 aaKnown RBP13.39□□□□□ -0.27
RPS28-204ENST00000602140 GPT2Q8TD30 523 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 BAP1Q92560 729 aa13.39□□□□□ -0.27
RPS28-204ENST00000602140 ARHGEF2Q92974 986 aaKnown RBP13.39□□□□□ -0.27
RPS28-204ENST00000602140 ISG20Q96AZ6 181 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms