RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 ZNF687Q8N1G0 1237 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 UMODL1-AS1Q8N2C9 162 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 PQLC3Q8N755 202 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 KDM1BQ8NB78 822 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 TSEN2Q8NCE0 465 aaKnown RBP10.28□□□□□ -0.76
UPF1-213ENST00000601981 PCDH19Q8TAB3 1148 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 FBXO25Q8TCJ0 367 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 USP33Q8TEY7 942 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 TTC17Q96AE7 1141 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 P2RY11Q96G91 374 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 PRRX2Q99811 253 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 FAM118BQ9BPY3 351 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 SPON2Q9BUD6 331 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 MAGEB5Q9BZ81 275 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 TXLNGYQ9BZA5 131 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 POLMQ9NP87 494 aaPredicted RBP10.28□□□□□ -0.76
UPF1-213ENST00000601981 MED4Q9NPJ6 270 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 THAP10Q9P2Z0 257 aaPredicted RBP10.28□□□□□ -0.76
UPF1-213ENST00000601981 MMP17Q9ULZ9 603 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 NEU3Q9UQ49 428 aa10.28□□□□□ -0.76
UPF1-213ENST00000601981 CACNA1IQ9P0X4 2223 aa10.27□□□□□ -0.76
UPF1-213ENST00000601981 MUC22E2RYF6 1773 aaPredicted RBP10.27□□□□□ -0.77
UPF1-213ENST00000601981 CFAP69A5D8W1 941 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 CBX4O00257 560 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 SYNCRIPO60506 623 aaKnown RBP10.27□□□□□ -0.77
UPF1-213ENST00000601981 ALDH1A2O94788 518 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 KLF8O95600 359 aaPredicted RBP10.27□□□□□ -0.77
UPF1-213ENST00000601981 HOXB2P14652 356 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 ADCY8P40145 1251 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 CXCL12P48061 93 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 NR2C2P49116 596 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 SLC20A2Q08357 652 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 MESP2Q0VG99 397 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 FZD5Q13467 585 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 ZNF234Q14588 700 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 SLMAPQ14BN4 828 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 HSP90B2PQ58FF3 399 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 CFAP58Q5T655 872 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 EGFLAMQ63HQ2 1017 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 LRIG3Q6UXM1 1119 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 Q6ZS52 159 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 BZW1Q7L1Q6 419 aaKnown RBP10.27□□□□□ -0.77
UPF1-213ENST00000601981 SYT13Q7L8C5 426 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 APCDD1Q8J025 514 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 PLD5Q8N7P1 536 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 DTWD2Q8NBA8 298 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 TXNDC5Q8NBS9 432 aaKnown RBP10.27□□□□□ -0.77
UPF1-213ENST00000601981 NSMCE1Q8WV22 266 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 P3H4Q92791 437 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 LMLNQ96KR4 655 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 FOXP3Q9BZS1 431 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 TSPYL1Q9H0U9 437 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 FBRSQ9HAH7 460 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 HAUS2Q9NVX0 235 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 ZNF212Q9UDV6 495 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 SUN2Q9UH99 717 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 ERVW-1Q9UQF0 538 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 ZNF318Q5VUA4 2279 aa10.27□□□□□ -0.77
UPF1-213ENST00000601981 A0A0D9SEW6 157 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 RASA4BC9J798 803 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 SGK1O00141 431 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 DFFAO00273 331 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 DNALI1O14645 258 aaPredicted RBP10.26□□□□□ -0.77
UPF1-213ENST00000601981 DCLK1O15075 740 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 RASA4O43374 803 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 PI15O43692 258 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 ZNF189O75820 626 aaPredicted RBP10.26□□□□□ -0.77
UPF1-213ENST00000601981 EPHX1P07099 455 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 RBP3P10745 1247 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 MX2P20592 715 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 AMPD1P23109 780 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 HSD17B3P37058 310 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 VASPP50552 380 aaPredicted RBP10.26□□□□□ -0.77
UPF1-213ENST00000601981 DGKEP52429 567 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 DHX9Q08211 1270 aaKnown RBP10.26□□□□□ -0.77
UPF1-213ENST00000601981 MTAPQ13126 283 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 XRCC4Q13426 336 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 TRIP13Q15645 432 aaPredicted RBP10.26□□□□□ -0.77
UPF1-213ENST00000601981 IZUMO3Q5VZ72 239 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 TMEM215Q68D42 235 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 MAMSTRQ6ZN01 415 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 CEP128Q6ZU80 1094 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 LRRC49Q8IUZ0 686 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 CDKL3Q8IVW4 592 aaPredicted RBP10.26□□□□□ -0.77
UPF1-213ENST00000601981 C1orf210Q8IVY1 113 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 IQCKQ8N0W5 287 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 BBS5Q8N3I7 341 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 ATPAF2Q8N5M1 289 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 CCDC33Q8N5R6 958 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 TMEM105Q8N8V8 129 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 IL17RCQ8NAC3 791 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 ATP11CQ8NB49 1132 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 TSTD1Q8NFU3 115 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 OR7D4Q8NG98 312 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 CYB5D2Q8WUJ1 264 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 EZH1Q92800 747 aaPredicted RBP10.26□□□□□ -0.77
UPF1-213ENST00000601981 ARHGEF2Q92974 986 aaKnown RBP10.26□□□□□ -0.77
UPF1-213ENST00000601981 RTP4Q96DX8 246 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 PKNOX2Q96KN3 472 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 RUFY1Q96T51 708 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms