RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 KBTBD6Q86V97 674 aa11.88□□□□□ -0.51
CHMP2A-207ENST00000600804 NAT16Q8N8M0 369 aa11.88□□□□□ -0.51
CHMP2A-207ENST00000600804 C12orf50Q8NA57 414 aaPredicted RBP11.88□□□□□ -0.51
CHMP2A-207ENST00000600804 SLC35B2Q8TB61 432 aa11.88□□□□□ -0.51
CHMP2A-207ENST00000600804 ACTL9Q8TC94 416 aa11.88□□□□□ -0.51
CHMP2A-207ENST00000600804 MUC3BQ9H195 1237 aa11.88□□□□□ -0.51
CHMP2A-207ENST00000600804 PDFQ9HBH1 243 aa11.88□□□□□ -0.51
CHMP2A-207ENST00000600804 ATP13A1Q9HD20 1204 aa11.88□□□□□ -0.51
CHMP2A-207ENST00000600804 ELOVL2Q9NXB9 296 aa11.88□□□□□ -0.51
CHMP2A-207ENST00000600804 IPO11Q9UI26 975 aaKnown RBP11.88□□□□□ -0.51
CHMP2A-207ENST00000600804 HPCAL4Q9UM19 191 aa11.88□□□□□ -0.51
CHMP2A-207ENST00000600804 HS3ST2Q9Y278 367 aa11.88□□□□□ -0.51
CHMP2A-207ENST00000600804 SMG1Q96Q15 3661 aaKnown RBP11.88□□□□□ -0.51
CHMP2A-207ENST00000600804 TCRBV7S2A1N4TA0A589 114 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 BCLAF3A2AJT9 711 aaKnown RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 MCF2LO15068 1137 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 ZNF185O15231 689 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 ATP5BP06576 529 aaKnown RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 SRPRAP08240 638 aaKnown RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 DLDP09622 509 aaKnown RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 CHRM1P11229 460 aaPredicted RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 HNRNPLP14866 589 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 POLR2EP19388 210 aaKnown RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 HOXA6P31267 233 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 ACVRL1P37023 503 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 PAFAH1B1P43034 410 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 CLCN6P51797 869 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 DYNLT1P63172 113 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 ARF5P84085 180 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 MESP2Q0VG99 397 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 GRSF1Q12849 480 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 PRKD1Q15139 912 aaPredicted RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 LLGL1Q15334 1064 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 WHAMMP3Q1A5X7 153 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 HSF5Q4G112 596 aaPredicted RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 PLA2G2CQ5R387 149 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 CCDC181Q5TID7 509 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 MBLAC2Q68D91 279 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 FSTL4Q6MZW2 842 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 TIGD7Q6NT04 549 aaPredicted RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 RETSATQ6NUM9 610 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 APCDD1Q8J025 514 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 SYNPOQ8N3V7 929 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 ATPAF2Q8N5M1 289 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 OR7D4Q8NG98 312 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 UCMAQ8WVF2 138 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 MAML1Q92585 1016 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 HAUS1Q96CS2 278 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 CELF6Q96J87 481 aaKnown RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 MS4A14Q96JA4 679 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 QKIQ96PU8 341 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 FBRSL1Q9HCM7 1045 aaKnown RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 AMACRQ9UHK6 382 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 VPS51Q9UID3 782 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 VPS28Q9UK41 221 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 DRG1Q9Y295 367 aaKnown RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 HEY1Q9Y5J3 304 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 CKAP5Q14008 2032 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 ANKRD11Q6UB99 2663 aaPredicted RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 GON4LQ3T8J9 2241 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 FREM2Q5SZK8 3169 aa11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 MUC22E2RYF6 1773 aaPredicted RBP11.87□□□□□ -0.51
CHMP2A-207ENST00000600804 PCNX2A6NKB5 2137 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 FASNP49327 2511 aaKnown RBP11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 CELSR3Q9NYQ7 3312 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 GOLGA6L10A0A0M3HER8 536 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 CFAP69A5D8W1 941 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 TBC1D3BA6NDS4 549 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 PRRT4C9JH25 899 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 CCDC188H7C350 402 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 DFFAO00273 331 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 TRIM24O15164 1050 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 MATN3O15232 486 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 LIASO43766 372 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 PEX11BO96011 259 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 ZNF806P0C7X5 589 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 IFI35P80217 286 aaPredicted RBP11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 ECT2LQ008S8 904 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 ENPP2Q13822 863 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 HNRNPDQ14103 355 aaKnown RBP11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 OASLQ15646 514 aaKnown RBP11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 SLC45A4Q5BKX6 768 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 IL31Q6EBC2 164 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 TCEAL6Q6IPX3 200 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 NPNTQ6UXI9 565 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 CEP68Q76N32 757 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 CDKL3Q8IVW4 592 aaPredicted RBP11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 TP53INP2Q8IXH6 220 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 PLPP6Q8IY26 295 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 CCDC13Q8IYE1 715 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 TEX26Q8N6G2 289 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 PRELID2Q8N945 189 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 TFB1MQ8WVM0 346 aaKnown RBP11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 GAB3Q8WWW8 586 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 EZH1Q92800 747 aaPredicted RBP11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 TCEAL3Q969E4 200 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 ISG20Q96AZ6 181 aaKnown RBP11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 RTP4Q96DX8 246 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 VAT1Q99536 393 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 CEP44Q9C0F1 390 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms