RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 IPO11Q9UI26 975 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-223ENST00000600552 WASF2Q9Y6W5 498 aa17.93■□□□□ 0.46
SHKBP1-223ENST00000600552 ITPR1Q14643 2758 aa17.93■□□□□ 0.46
SHKBP1-223ENST00000600552 EIF4E1BA6NMX2 242 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 NEMP1O14524 444 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 ZNF821O75541 412 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 ZMPSTE24O75844 475 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 TPM2P07951 284 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 EEF1GP26641 437 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 ITPKBP27987 946 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 SDC4P31431 198 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 ARF5P84085 180 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 ZNF211Q13398 564 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 PROX2Q3B8N5 592 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 ARL13BQ3SXY8 428 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 SOWAHCQ53LP3 525 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 GCNT7Q6ZNI0 430 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 PCDH20Q8N6Y1 951 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 TMEM145Q8NBT3 493 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 JOSD2Q8TAC2 188 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 GPT2Q8TD30 523 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 FEM1CQ96JP0 617 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 SLC17A9Q9BYT1 436 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 SCUBE2Q9NQ36 999 aa17.92■□□□□ 0.46
SHKBP1-223ENST00000600552 KRIT1O00522 736 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 NEBLO76041 1014 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 ADRB3P13945 408 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 CHRNB2P17787 502 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 L1CAMP32004 1257 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 ADRA1BP35368 520 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 ABCG1P45844 678 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 INSM1Q01101 510 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 CDR2Q01850 454 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 SLC20A2Q08357 652 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 SGCGQ13326 291 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 CCDC14Q49A88 953 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 FKBP15Q5T1M5 1219 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 ACBD5Q5T8D3 534 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 SMYD5Q6GMV2 418 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 ZNF783Q6ZMS7 281 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 LRRC69Q6ZNQ3 347 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 PARS2Q7L3T8 475 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 NETO2Q8NC67 525 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 CEP44Q9C0F1 390 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 GANQ9H2C0 597 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 NDFIP2Q9NV92 336 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 ZNF212Q9UDV6 495 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 NOCTQ9UK39 431 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 CLCA2Q9UQC9 943 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 BAHCC1Q9P281 2608 aa17.91■□□□□ 0.46
SHKBP1-223ENST00000600552 POM121BA6NF01 834 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 IGLON5A6NGN9 336 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 A6NNZ2 444 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 FAM72CH0Y354 149 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 RAD51BO15315 384 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 TLX3O43711 291 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 PIAS2O75928 621 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 ITGB7P26010 798 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 SOX5P35711 763 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 RPS21P63220 83 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 FMO1Q01740 532 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 ILKQ13418 452 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 KRT31Q15323 416 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 LRRC73Q5JTD7 316 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 ARTNQ5T4W7 220 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 FAM72AQ5TYM5 149 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 FAM72DQ6L9T8 149 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 FAM72BQ86X60 149 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 SLC22A18ASQ8N1D0 253 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 CCDC185Q8N715 623 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 OR4C6Q8NH72 309 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 TMEM51Q9NW97 253 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 PPARGC1AQ9UBK2 798 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 HPCAL4Q9UM19 191 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 ITM2BQ9Y287 266 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 FADS3Q9Y5Q0 445 aa17.9■□□□□ 0.46
SHKBP1-223ENST00000600552 C16orf96A6NNT2 1141 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 EPHB6O15197 1021 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 MT-CO3P00414 261 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 UGT2B4P06133 528 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 PLEKP08567 350 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 ALPPL2P10696 532 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 ACP1P24666 158 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 EIF2S3P41091 472 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 E2F1Q01094 437 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 FGL2Q14314 439 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 ACAP1Q15027 740 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 POLD3Q15054 466 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 TMEM259Q4ZIN3 620 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 ATXN7L2Q5T6C5 722 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 KIAA1161Q6NSJ0 714 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 SCYL2Q6P3W7 929 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 ZNF677Q86XU0 584 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 FAM172AQ8WUF8 416 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 ARHGEF2Q92974 986 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 BMFQ96LC9 184 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 SELENOOQ9BVL4 669 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 ADAM22Q9P0K1 906 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 GGT7Q9UJ14 662 aa17.89■□□□□ 0.45
SHKBP1-223ENST00000600552 HS3ST3A1Q9Y663 406 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms