RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ALFQ53S48 1182 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 RAB41Q5JT25 222 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 SPDYAQ5MJ70 313 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 STEAP4Q687X5 459 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 PDPK2PQ6A1A2 396 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 SLC30A9Q6PML9 568 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 LIMS2Q7Z4I7 341 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 TDRD5Q8NAT2 981 aaKnown RBP11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 ACE2Q9BYF1 805 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 GLOD4Q9HC38 313 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 PLA2G4CQ9UP65 541 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 CRYL1Q9Y2S2 319 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 TMEM233B4DJY2 109 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 KPNA6O60684 536 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 TGDSO95455 350 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 TPBGLP0DKB5 382 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 IRF1P10914 325 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 HAPLN1P10915 354 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 HNRNPLP14866 589 aaKnown RBP eCLIP11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 SEMA3BQ13214 749 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 FBXO48Q5FWF7 155 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 TLDC1Q6P9B6 456 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 RNF180Q86T96 592 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 PHTF2Q8N3S3 785 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 UCMAQ8WVF2 138 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 PSMG2Q969U7 264 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 NXNL1Q96CM4 212 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 HMCESQ96FZ2 354 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 SUDS3Q9H7L9 328 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 COG4Q9H9E3 785 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 EBF2Q9HAK2 575 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 PIDD1Q9HB75 910 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 CASS4Q9NQ75 786 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 EIF2B3Q9NR50 452 aaKnown RBP11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 XPR1Q9UBH6 696 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 TAGLN3Q9UI15 199 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 SCOCQ9UIL1 159 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 Q9Y3F1 56 aa11.7□□□□□ -0.54
ARHGEF1-220ENST00000600274 MTSS1O43312 755 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 ALDH1A2O94788 518 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 PIGNO95427 931 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 WNT3AP56704 352 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 SLC10A7Q0GE19 358 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 SLC9B1Q4ZJI4 515 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 TMEM198Q66K66 360 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 SCUBE1Q8IWY4 988 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 SLC26A7Q8TE54 656 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 CYP2S1Q96SQ9 504 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 GATA5Q9BWX5 397 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 FAM95CA0A1B0GW59 222 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 ADAMTS4O75173 837 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 TCN1P20061 433 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 GRIA4P48058 902 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 RAB27AP51159 221 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 TAF10Q12962 218 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 DUSP4Q13115 394 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 VARS2Q5ST30 1063 aaKnown RBP11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 ARHGAP24Q8N264 748 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 PYDC1Q8WXC3 89 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 TBC1D13Q9NVG8 400 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 ARHGEF38Q9NXL2 777 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 LRFN2Q9ULH4 789 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 AAR2Q9Y312 384 aaKnown RBP11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 KCTD3Q9Y597 815 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 CA12O43570 354 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 TIMM44O43615 452 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 SIN3BO75182 1162 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 CKBP12277 381 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 ARSAP15289 507 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 CD1EP15812 388 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 IDH3AP50213 366 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 ACLYP53396 1101 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 PRAMEP78395 509 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 IRX1P78414 480 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 MAPRE1Q15691 268 aaKnown RBP11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 ZNF789Q5FWF6 425 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 CNSTQ6PJW8 725 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 RTN4RL1Q86UN2 441 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 CD99L2Q8TCZ2 262 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 CATSPER2Q96P56 530 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 OR52B2Q96RD2 323 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 STARD7Q9NQZ5 370 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 DSEQ9UL01 958 aa11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 MTF2Q9Y483 593 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF1-220ENST00000600274 BIRC5O15392 142 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 ANXA9O76027 345 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 SLC10A3P09131 477 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 NPY2RP49146 381 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 SCAPQ12770 1279 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 ASPHQ12797 758 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 CLLU1OSQ5K130 101 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 RBM20Q5T481 1227 aaKnown RBP11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 SNX30Q5VWJ9 437 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 FAM171BQ6P995 826 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 RIPOR1Q6ZS17 1223 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 SDCCAG8Q86SQ7 713 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 TMEM135Q86UB9 458 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 ARHGAP12Q8IWW6 846 aa11.68□□□□□ -0.54
ARHGEF1-220ENST00000600274 DEFB107AQ8IZN7 70 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms