RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 FAM182AQ5T1J6 154 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 ATXN7L2Q5T6C5 722 aaPredicted RBP13.97□□□□□ -0.17
VRK3-219ENST00000600137 KAZNQ674X7 775 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 ZNF776Q68DI1 518 aaPredicted RBP13.97□□□□□ -0.17
VRK3-219ENST00000600137 ZNF354CQ86Y25 554 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 MMAAQ8IVH4 418 aaKnown RBP13.97□□□□□ -0.17
VRK3-219ENST00000600137 AADATQ8N5Z0 425 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 TSEN2Q8NCE0 465 aaKnown RBP13.97□□□□□ -0.17
VRK3-219ENST00000600137 TMIEQ8NEW7 156 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 GAB3Q8WWW8 586 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 PRCCQ92733 491 aaPredicted RBP13.97□□□□□ -0.17
VRK3-219ENST00000600137 HDAC11Q96DB2 347 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 PHOX2BQ99453 314 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 LGMNQ99538 433 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 HEMGNQ9BXL5 484 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 OSBPL8Q9BZF1 889 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 TM6SF2Q9BZW4 377 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 TRMT1Q9NXH9 659 aaKnown RBP13.97□□□□□ -0.17
VRK3-219ENST00000600137 SERGEFQ9UGK8 458 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 HCN4Q9Y3Q4 1203 aa13.97□□□□□ -0.17
VRK3-219ENST00000600137 MATN3O15232 486 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 MID1O15344 667 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 INSIG1O15503 277 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 GJB3O75712 270 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 ZFXP17010 805 aaPredicted RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 CR2P20023 1033 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 SLC8A1P32418 973 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 CNR2P34972 360 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 CSNK1DP48730 415 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 CCNHP51946 323 aaPredicted RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 DYNLT1P63172 113 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 NHLH1Q02575 133 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 ZBTB16Q05516 673 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 PPIDQ08752 370 aaKnown RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 NSUN2Q08J23 767 aaKnown RBP eCLIP13.96□□□□□ -0.17
VRK3-219ENST00000600137 KLF1Q13351 362 aaPredicted RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 TFDP2Q14188 446 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 RFTN1Q14699 578 aaPredicted RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 MYLK3Q32MK0 819 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 KIAA1324Q6UXG2 1013 aaKnown RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 CACUL1Q86Y37 369 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 PGBD3Q8N328 593 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 SUMF1Q8NBK3 374 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 TRIM58Q8NG06 486 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 OR2AP1Q8NGE2 309 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 OR8D1Q8WZ84 308 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 ATOH1Q92858 354 aaPredicted RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 ARRDC3Q96B67 414 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 ZC3H10Q96K80 434 aaKnown RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 PSKH2Q96QS6 385 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 MAK16Q9BXY0 300 aaKnown RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 IRF2BPLQ9H1B7 796 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 DUSP15Q9H1R2 295 aaPredicted RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 PABPC3Q9H361 631 aaKnown RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 SP110Q9HB58 689 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 WSB2Q9NYS7 404 aaPredicted RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 BCCIPQ9P287 314 aaKnown RBP eCLIP13.96□□□□□ -0.17
VRK3-219ENST00000600137 HECAQ9UBI9 543 aaPredicted RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 HEY1Q9Y5J3 304 aa13.96□□□□□ -0.17
VRK3-219ENST00000600137 ZFHX2Q9C0A1 2572 aaPredicted RBP13.96□□□□□ -0.17
VRK3-219ENST00000600137 CEP192Q8TEP8 1941 aa13.96□□□□□ -0.18
VRK3-219ENST00000600137 OTOGLQ3ZCN5 2332 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 THADAQ6YHU6 1953 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 TCRBV7S2A1N4TA0A589 114 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 PROB1E7EW31 1015 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 PLK4O00444 970 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 ZSCAN12O43309 604 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 BNIP3LO60238 219 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 LEFTY1O75610 366 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 POP4O95707 220 aaKnown RBP13.95□□□□□ -0.18
VRK3-219ENST00000600137 TGM2P21980 687 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 NR2C2P49116 596 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 ZNF33AQ06730 810 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 HNRNPDQ14103 355 aaKnown RBP13.95□□□□□ -0.18
VRK3-219ENST00000600137 LBRQ14739 615 aaKnown RBP13.95□□□□□ -0.18
VRK3-219ENST00000600137 USP39Q53GS9 565 aaKnown RBP13.95□□□□□ -0.18
VRK3-219ENST00000600137 ARSIQ5FYB1 569 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 TMCO4Q5TGY1 634 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 B4GALNT4Q76KP1 1039 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 CCDC50Q8IVM0 306 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 ATPAF2Q8N5M1 289 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 UBL4BQ8N7F7 174 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 CNTD1Q8N815 330 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 OR6K2Q8NGY2 324 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 PIP4K2CQ8TBX8 421 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.95□□□□□ -0.18
VRK3-219ENST00000600137 EXOC2Q96KP1 924 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 IL12RB2Q99665 862 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 HEPHQ9BQS7 1158 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 CPEB1Q9BZB8 566 aaKnown RBP13.95□□□□□ -0.18
VRK3-219ENST00000600137 EPC1Q9H2F5 836 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 KCND1Q9NSA2 647 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 EVLQ9UI08 416 aaPredicted RBP13.95□□□□□ -0.18
VRK3-219ENST00000600137 CYP8B1Q9UNU6 501 aa13.95□□□□□ -0.18
VRK3-219ENST00000600137 DOCK9Q9BZ29 2069 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 TTC24A2A3L6 582 aaPredicted RBP13.94□□□□□ -0.18
VRK3-219ENST00000600137 APOC4-APOC2K7ER74 178 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 ZNF217O75362 1048 aa13.94□□□□□ -0.18
VRK3-219ENST00000600137 RPP40O75818 363 aaKnown RBP13.94□□□□□ -0.18
VRK3-219ENST00000600137 IL1BP01584 269 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms