RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 POLR1BQ9H9Y6 1135 aa17.54■□□□□ 0.4
SMG9-210ENST00000600097 MPP6Q9NZW5 540 aa17.54■□□□□ 0.4
SMG9-210ENST00000600097 CSNK1G3Q9Y6M4 447 aa17.54■□□□□ 0.4
SMG9-210ENST00000600097 WASF2Q9Y6W5 498 aa17.54■□□□□ 0.4
SMG9-210ENST00000600097 SPTY2D1-AS1A0A0U1RR47 76 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 RNF103O00237 685 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 FOXN3O00409 490 aaPredicted RBP17.53■□□□□ 0.4
SMG9-210ENST00000600097 AP1G1O43747 822 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 LZTS3O60299 673 aaPredicted RBP17.53■□□□□ 0.4
SMG9-210ENST00000600097 CSF2P04141 144 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 ADRB3P13945 408 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 NME1P15531 152 aaKnown RBP17.53■□□□□ 0.4
SMG9-210ENST00000600097 TFE3P19532 575 aaPredicted RBP17.53■□□□□ 0.4
SMG9-210ENST00000600097 L1CAMP32004 1257 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 CLCN1P35523 988 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 RABIFP47224 123 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 SERPINH1P50454 418 aaKnown RBP17.53■□□□□ 0.4
SMG9-210ENST00000600097 TMPRSS3P57727 454 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 RHDQ02161 417 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
SMG9-210ENST00000600097 FZD2Q14332 565 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 ZNF542PQ5EBM4 170 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 ZCCHC8Q6NZY4 707 aaKnown RBP17.53■□□□□ 0.4
SMG9-210ENST00000600097 PARGQ86W56 976 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 TMEM35BQ8NCS4 154 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 OR7D4Q8NG98 312 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 MAPK15Q8TD08 544 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 GRAMD1AQ96CP6 724 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 WBP1Q96G27 269 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 HAPLN3Q96S86 360 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 TBCBQ99426 244 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 HEPHQ9BQS7 1158 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 SPON2Q9BUD6 331 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 PDCL3Q9H2J4 239 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 THSD1Q9NS62 852 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 DNAJC12Q9UKB3 198 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 FADS3Q9Y5Q0 445 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 SNX10Q9Y5X0 201 aa17.53■□□□□ 0.4
SMG9-210ENST00000600097 FLNBO75369 2602 aaKnown RBP17.53■□□□□ 0.4
SMG9-210ENST00000600097 LY6G6EA0A0G2JKS1 128 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 CXorf51AA0A1B0GTR3 108 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 POM121BA6NF01 834 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 SRGAP2O75044 1071 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 ZNF821O75541 412 aaPredicted RBP17.52■□□□□ 0.4
SMG9-210ENST00000600097 ZMPSTE24O75844 475 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 ENDOD1O94919 500 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 PAK4O96013 591 aaPredicted RBP17.52■□□□□ 0.4
SMG9-210ENST00000600097 CDH5P33151 784 aaPredicted RBP17.52■□□□□ 0.4
SMG9-210ENST00000600097 GABRB2P47870 512 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 CFHR1Q03591 330 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 SGCGQ13326 291 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 CARD16Q5EG05 197 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 FAM102AQ5T9C2 384 aaPredicted RBP17.52■□□□□ 0.4
SMG9-210ENST00000600097 IGF2-ASQ6U949 168 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 FAM71AQ8IYT1 594 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 ZNF548Q8NEK5 533 aaPredicted RBP17.52■□□□□ 0.4
SMG9-210ENST00000600097 IFI44Q8TCB0 444 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 C18orf8Q96DM3 657 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 NAF1Q96HR8 494 aaKnown RBP17.52■□□□□ 0.4
SMG9-210ENST00000600097 LENG8Q96PV6 779 aaPredicted RBP17.52■□□□□ 0.4
SMG9-210ENST00000600097 OSBPL2Q9H1P3 480 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 ATP13A1Q9HD20 1204 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 SIX2Q9NPC8 291 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 PLCB1Q9NQ66 1216 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 CHMP5Q9NZZ3 219 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 IPO11Q9UI26 975 aaKnown RBP17.52■□□□□ 0.4
SMG9-210ENST00000600097 U3KQA8 63 aa17.52■□□□□ 0.4
SMG9-210ENST00000600097 FPGTO14772 594 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 TSPAN6O43657 245 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 NEBLO76041 1014 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 ZIC2O95409 532 aaPredicted RBP17.51■□□□□ 0.39
SMG9-210ENST00000600097 MYF5P13349 255 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 PLA2G2AP14555 144 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 MTIF2P46199 727 aaKnown RBP17.51■□□□□ 0.39
SMG9-210ENST00000600097 DNA2P51530 1060 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 CCNHP51946 323 aaPredicted RBP17.51■□□□□ 0.39
SMG9-210ENST00000600097 FGL2Q14314 439 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 ISXQ2M1V0 245 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 TAF1BQ53T94 588 aaPredicted RBP17.51■□□□□ 0.39
SMG9-210ENST00000600097 PCSK4Q6UW60 755 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 PLPP6Q8IY26 295 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 TPCN2Q8NHX9 752 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 KCNE4Q8WWG9 221 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 RAB7BQ96AH8 199 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 C1QTNF2Q9BXJ5 285 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 DPH1Q9BZG8 443 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 ZYG11BQ9C0D3 744 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 ZNF212Q9UDV6 495 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 SALL4Q9UJQ4 1053 aa17.51■□□□□ 0.39
SMG9-210ENST00000600097 SETXQ7Z333 2677 aaKnown RBP17.5■□□□□ 0.39
SMG9-210ENST00000600097 MGAQ8IWI9 3026 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 TPP1O14773 563 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 AQP9O43315 295 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 ETFBP38117 255 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 GNA12Q03113 381 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 PDE1CQ14123 709 aaPredicted RBP17.5■□□□□ 0.39
SMG9-210ENST00000600097 XYLT1Q86Y38 959 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 IRF2BP1Q8IU81 584 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 MSANTD4Q8NCY6 345 aa17.5■□□□□ 0.39
SMG9-210ENST00000600097 DENND6BQ8NEG7 585 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms