RNA–Protein interactions for RNA: ENST00000599569.2

SSR4P1-203, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 2,260 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-203ENST00000599569 MRPL42Q9Y6G3 142 aaKnown RBP16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 WASH4PA8MWX3 477 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 TMEM114B3SHH9 223 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 TMEM189-UBE2V1I3L0A0 370 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 SIN3BO75182 1162 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 APOA4P06727 396 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 CKBP12277 381 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 GABRB3P28472 473 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 USP10Q14694 798 aaKnown RBP16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 UGP2Q16851 508 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 CLLU1OSQ5K130 101 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 ESRP1Q6NXG1 681 aaKnown RBP16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 NAPRTQ6XQN6 538 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 HOMEZQ8IX15 550 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 COLGALT2Q8IYK4 626 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 SLC43A3Q8NBI5 491 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 PPHLN1Q8NEY8 458 aaKnown RBP16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 PTCD2Q8WV60 388 aaKnown RBP16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 FUBP3Q96I24 572 aaKnown RBP eCLIP16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 C1QTNF1Q9BXJ1 281 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 TLR6Q9Y2C9 796 aa16.06■□□□□ 0.16
SSR4P1-203ENST00000599569 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 H2AFYO75367 372 aaKnown RBP16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 TM7SF2O76062 418 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 VAPBO95292 243 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 HSPA4LO95757 839 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 OR1G1P47890 313 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 ARCN1P48444 511 aaKnown RBP16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 NFE2Q16621 373 aaPredicted RBP16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 DDR2Q16832 855 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 NOMO2Q5JPE7 1267 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 PIK3R6Q5UE93 754 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 SDHAF4Q5VUM1 108 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 RANBP10Q6VN20 620 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 SLC39A13Q96H72 371 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 C8orf48Q96LL4 319 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 FAM161BQ96MY7 647 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 FSD1LQ9BXM9 530 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 OXCT2Q9BYC2 517 aaPredicted RBP16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 FBXO44Q9H4M3 255 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 YY1AP1Q9H869 796 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 MRM3Q9HC36 420 aaKnown RBP16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 OXSMQ9NWU1 459 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 FNIP2Q9P278 1114 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 CPSF2Q9P2I0 782 aaKnown RBP16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 IPO11Q9UI26 975 aaKnown RBP16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 TCAF1Q9Y4C2 921 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 FNDC1Q4ZHG4 1894 aaPredicted RBP16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 ARVCFO00192 962 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 PMPCBO75439 489 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 NEBLO76041 1014 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 SLC2A3P11169 496 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 SAT1P21673 171 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 VWA5B1Q5TIE3 1220 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 MSANTD2Q6P1R3 559 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 LCA5Q86VQ0 697 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 SCUBE1Q8IWY4 988 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 TMEM151AQ8N4L1 468 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 ZNF781Q8N8C0 355 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 RDH11Q8TC12 318 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 MRGPRX2Q96LB1 330 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 ACE2Q9BYF1 805 aaPredicted RBP16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 CDH19Q9H159 772 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 TASP1Q9H6P5 420 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 STOML1Q9UBI4 398 aa16.05■□□□□ 0.16
SSR4P1-203ENST00000599569 NYNRINQ9P2P1 1898 aaKnown RBP16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 PSMG1O95456 288 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 ARNTP27540 789 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 GPR15P49685 360 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 FAM189BP81408 668 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 MXRA7P84157 204 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 USP4Q13107 963 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 CTBP1Q13363 440 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 SLC12A1Q13621 1099 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 RCN1Q15293 331 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 TAF11Q15544 211 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 DENND6AQ8IWF6 608 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 TSNARE1Q96NA8 513 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 THTPAQ9BU02 230 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 GATA5Q9BWX5 397 aaPredicted RBP16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 NOL6Q9H6R4 1146 aaKnown RBP16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 COG4Q9H9E3 785 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 MYO16Q9Y6X6 1858 aa16.04■□□□□ 0.16
SSR4P1-203ENST00000599569 F8W8V4 182 aa16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 PHGDHO43175 533 aaKnown RBP16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 KRT36O76013 467 aa16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 SLC35E2BP0CK96 405 aa16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 COL6A2P12110 1019 aa16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 GCKP35557 465 aa16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 CPOXP36551 454 aa16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 POLD2P49005 469 aa16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 MNX1P50219 401 aaPredicted RBP16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 MBTPS1Q14703 1052 aa16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 CNGA3Q16281 694 aa16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 TRAF7Q6Q0C0 670 aa16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 ULK2Q8IYT8 1036 aa16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 UMODL1-AS1Q8N2C9 162 aa16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 LINC01599Q8WXQ3 324 aa16.03■□□□□ 0.16
SSR4P1-203ENST00000599569 STMN2Q93045 179 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms