RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 MYBL2P10244 700 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 CES1P23141 567 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 ECHS1P30084 290 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 TNNT3P45378 269 aaPredicted RBP15.7■□□□□ 0.1
UPF1-206ENST00000598471 NUMBP49757 651 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 SERPINH1P50454 418 aaKnown RBP15.7■□□□□ 0.1
UPF1-206ENST00000598471 RHOAP61586 193 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 AAK1Q2M2I8 961 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 MBLAC2Q68D91 279 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 ASTLQ6HA08 431 aaPredicted RBP15.7■□□□□ 0.1
UPF1-206ENST00000598471 LINGO4Q6UY18 593 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 NUDT18Q6ZVK8 323 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 GSPT2Q8IYD1 628 aaKnown RBP15.7■□□□□ 0.1
UPF1-206ENST00000598471 ZCCHC9Q8N567 271 aaKnown RBP15.7■□□□□ 0.1
UPF1-206ENST00000598471 MCUQ8NE86 351 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 HNRNPLLQ8WVV9 542 aaKnown RBP15.7■□□□□ 0.1
UPF1-206ENST00000598471 MGME1Q9BQP7 344 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 RPP25Q9BUL9 199 aaKnown RBP15.7■□□□□ 0.1
UPF1-206ENST00000598471 NEUROG2Q9H2A3 272 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 LRRC40Q9H9A6 602 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 ARFGAP3Q9NP61 516 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 VPS45Q9NRW7 570 aa15.7■□□□□ 0.1
UPF1-206ENST00000598471 F5H423 210 aaPredicted RBP15.69■□□□□ 0.1
UPF1-206ENST00000598471 AP2A1O95782 977 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 CISD3P0C7P0 127 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 H2AFXP16104 143 aaPredicted RBP15.69■□□□□ 0.1
UPF1-206ENST00000598471 GJA4P35212 333 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 NNMTP40261 264 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 ARL4CP56559 192 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 ECT2LQ008S8 904 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 EIF4HQ15056 248 aaKnown RBP15.69■□□□□ 0.1
UPF1-206ENST00000598471 CYTH1Q15438 398 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 ANKRD22Q5VYY1 191 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 ALG1LQ6GMV1 187 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 ATP11CQ8NB49 1132 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 AENQ8WTP8 325 aaKnown RBP15.69■□□□□ 0.1
UPF1-206ENST00000598471 TTC17Q96AE7 1141 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 IMP4Q96G21 291 aaKnown RBP15.69■□□□□ 0.1
UPF1-206ENST00000598471 CIPCQ9C0C6 399 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 PHACTR1Q9C0D0 580 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 XAB2Q9HCS7 855 aaKnown RBP15.69■□□□□ 0.1
UPF1-206ENST00000598471 GTSE1Q9NYZ3 720 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 FAM153AQ9UHL3 310 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 SLC8A2Q9UPR5 921 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 HS3ST2Q9Y278 367 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 BRWD1Q9NSI6 2320 aa15.69■□□□□ 0.1
UPF1-206ENST00000598471 GOLGA8MH3BSY2 632 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 AP3B1O00203 1094 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 ARNTLO00327 626 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 TIMM44O43615 452 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 PPFIA2O75334 1257 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 TMEM63AO94886 807 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 SRPRAP08240 638 aaKnown RBP15.68■□□□□ 0.1
UPF1-206ENST00000598471 MAPK8P45983 427 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 MAXP61244 160 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 KDSRQ06136 332 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 MPP3Q13368 585 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 SLMAPQ14BN4 828 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 E2F5Q15329 346 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 SLC14A2Q15849 920 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 HIF1AQ16665 826 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 GEN1Q17RS7 908 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 GAB4Q2WGN9 574 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 RALGPS1Q5JS13 557 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 FAM182AQ5T1J6 154 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 NAPEPLDQ6IQ20 393 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 CENPUQ71F23 418 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 LINC00523Q86TU6 105 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 ADIPOR2Q86V24 386 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 CCDC25Q86WR0 208 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 C12orf40Q86WS4 652 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 SUGP1Q8IWZ8 645 aaKnown RBP15.68■□□□□ 0.1
UPF1-206ENST00000598471 KLHDC8BQ8IXV7 354 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 PDIK1LQ8N165 341 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.68■□□□□ 0.1
UPF1-206ENST00000598471 PDCD7Q8N8D1 485 aaKnown RBP15.68■□□□□ 0.1
UPF1-206ENST00000598471 TSEN2Q8NCE0 465 aaKnown RBP15.68■□□□□ 0.1
UPF1-206ENST00000598471 TTC8Q8TAM2 541 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 UCMAQ8WVF2 138 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 ANKRD7Q92527 254 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 CAVIN3Q969G5 261 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 ZNF419Q96HQ0 510 aaPredicted RBP15.68■□□□□ 0.1
UPF1-206ENST00000598471 SEMA3CQ99985 751 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 FSD1LQ9BXM9 530 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 CEP44Q9C0F1 390 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 KCNK12Q9HB15 430 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 SCUBE2Q9NQ36 999 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 TRPV5Q9NQA5 729 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 LIMD1Q9UGP4 676 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 ACTL7AQ9Y615 435 aa15.68■□□□□ 0.1
UPF1-206ENST00000598471 TCRBV7S3A2A0A539 114 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 OTOL1A6NHN0 477 aaPredicted RBP15.67■□□□□ 0.1
UPF1-206ENST00000598471 TP73O15350 636 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 EIF3HO15372 352 aaKnown RBP eCLIP15.67■□□□□ 0.1
UPF1-206ENST00000598471 SUN1O94901 812 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 CD160O95971 181 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 IGSF6O95976 241 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 SERPINF2P08697 491 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 MLNP12872 115 aa15.67■□□□□ 0.1
UPF1-206ENST00000598471 SRCP12931 536 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms