RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 IP6K2Q9UHH9 426 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 ANKRD36A6QL64 1941 aa17.68■□□□□ 0.42
IRF3-208ENST00000594387 CNOT1A5YKK6 2376 aaKnown RBP17.67■□□□□ 0.42
IRF3-208ENST00000594387 A0A087X0T9 212 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 ARHGAP42A6NI28 874 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 RASA4BC9J798 803 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 MYO1FO00160 1098 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 RASA4O43374 803 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 LEFTY1O75610 366 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 PCDH8O95206 1070 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 POP4O95707 220 aaKnown RBP17.67■□□□□ 0.42
IRF3-208ENST00000594387 GSRP00390 522 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 FAM228BP0C875 321 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 ZNF883P0CG24 379 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 PCK1P35558 622 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 ARL4AP40617 200 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 CCNHP51946 323 aaPredicted RBP17.67■□□□□ 0.42
IRF3-208ENST00000594387 STAT4Q14765 748 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 BOLA3Q53S33 107 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 TRIM69Q86WT6 500 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 UMODL1-AS1Q8N2C9 162 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 OR2AP1Q8NGE2 309 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 SETD7Q8WTS6 366 aaKnown RBP17.67■□□□□ 0.42
IRF3-208ENST00000594387 SNRNP25Q9BV90 132 aaKnown RBP17.67■□□□□ 0.42
IRF3-208ENST00000594387 TM6SF2Q9BZW4 377 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 THAP2Q9H0W7 228 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 TM7SF3Q9NS93 570 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 GPATCH2LQ9NWQ4 482 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 DMTF1Q9Y222 760 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 SHROOM3Q8TF72 1996 aa17.67■□□□□ 0.42
IRF3-208ENST00000594387 KRIT1O00522 736 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 VILLO15195 856 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 RNGTTO60942 597 aaKnown RBP17.66■□□□□ 0.42
IRF3-208ENST00000594387 IGSF6O95976 241 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 CTSLP07711 333 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 MAT2AP31153 395 aaKnown RBP17.66■□□□□ 0.42
IRF3-208ENST00000594387 SSR1P43307 286 aaKnown RBP17.66■□□□□ 0.42
IRF3-208ENST00000594387 NEK3P51956 506 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 NDST2P52849 883 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 METAP1P53582 386 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 RHOAP61586 193 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 ZNF252P-AS1Q0IIN9 211 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 KIF19Q2TAC6 998 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 INO80DQ53TQ3 878 aaPredicted RBP17.66■□□□□ 0.42
IRF3-208ENST00000594387 ARTNQ5T4W7 220 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 AGBL4Q5VU57 503 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 NAPEPLDQ6IQ20 393 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 LEKR1Q6ZMV7 388 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 GDAP1L1Q96MZ0 367 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 SLC6A18Q96N87 628 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 ANP32EQ9BTT0 268 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 NUP85Q9BW27 656 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 OSBPL1AQ9BXW6 950 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 HDAC8Q9BY41 377 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 ANAPC7Q9UJX3 599 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 NEU3Q9UQ49 428 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 SNX11Q9Y5W9 270 aa17.66■□□□□ 0.42
IRF3-208ENST00000594387 H3BRJ5 948 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 NEMP1O14524 444 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 AKR1B10O60218 316 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 LRCH4O75427 683 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 ITGB7P26010 798 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 EIF4A3P38919 411 aaKnown RBP17.65■□□□□ 0.42
IRF3-208ENST00000594387 HCAR3P49019 387 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 SERINC3Q13530 473 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 HADHQ16836 314 aaKnown RBP17.65■□□□□ 0.42
IRF3-208ENST00000594387 RFX8Q6ZV50 586 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 CTNNBL1Q8WYA6 563 aaPredicted RBP17.65■□□□□ 0.42
IRF3-208ENST00000594387 FAM131CQ96AQ9 280 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 ARRDC3Q96B67 414 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 HMCESQ96FZ2 354 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 FEM1CQ96JP0 617 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 ARHGAP20Q9P2F6 1191 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 UBA2Q9UBT2 640 aaPredicted RBP17.65■□□□□ 0.42
IRF3-208ENST00000594387 LCMT1Q9UIC8 334 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 WASF2Q9Y6W5 498 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 DMXL1Q9Y485 3027 aa17.65■□□□□ 0.42
IRF3-208ENST00000594387 TDRD6O60522 2096 aaKnown RBP17.64■□□□□ 0.41
IRF3-208ENST00000594387 PRAMEF26H0Y7S4 382 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 GIPC1O14908 333 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 LATO43561 262 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 ZNF821O75541 412 aaPredicted RBP17.64■□□□□ 0.41
IRF3-208ENST00000594387 CD59P13987 128 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 HNRNPH3P31942 346 aaKnown RBP17.64■□□□□ 0.41
IRF3-208ENST00000594387 CCT8P50990 548 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 PPP2CBP62714 309 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 PPP2CAP67775 309 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 GRM3Q14832 879 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 MYLK3Q32MK0 819 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 INAVAQ3KP66 663 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 PIP5KL1Q5T9C9 394 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 PIP4P1Q86T03 277 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 VSTM4Q8IW00 320 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 NAXDQ8IW45 347 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 LZTR1Q8N653 840 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 ARFGAP1Q8N6T3 406 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 MFSD2AQ8NA29 543 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 HSPH1Q92598 858 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 RAB7BQ96AH8 199 aa17.64■□□□□ 0.41
IRF3-208ENST00000594387 ARHGEF26Q96DR7 871 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms