RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 RNF148Q8N7C7 305 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 KYQ8NBH2 561 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 RCN3Q96D15 328 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 MAML3Q96JK9 1138 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 DNAJC1Q96KC8 554 aaKnown RBP16.74■□□□□ 0.27
LIG1-206ENST00000594067 SGIP1Q9BQI5 828 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 COLEC11Q9BWP8 271 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 TKTL2Q9H0I9 626 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 RBM38Q9H0Z9 239 aaKnown RBP16.74■□□□□ 0.27
LIG1-206ENST00000594067 OR12D3Q9UGF7 316 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 MID2Q9UJV3 735 aa16.74■□□□□ 0.27
LIG1-206ENST00000594067 MYBPHLA2RUH7 354 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 PDHXO00330 501 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 PTGESO14684 152 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 CRTAMO95727 393 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 GABRB3P28472 473 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 THOP1P52888 689 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 PKNOX1P55347 436 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 ARL13BQ3SXY8 428 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 PRAMEF19Q5SWL8 479 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 KLHDC10Q6PID8 442 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 LCA5Q86VQ0 697 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 ZMIZ2Q8NF64 920 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 SPATA22Q8NHS9 363 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 USP13Q92995 863 aaPredicted RBP16.73■□□□□ 0.27
LIG1-206ENST00000594067 LENG1Q96BZ8 264 aaPredicted RBP16.73■□□□□ 0.27
LIG1-206ENST00000594067 WDCPQ9H6R7 721 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 RAB26Q9ULW5 256 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 GABRDO14764 452 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 TREHO43280 583 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 LRIG2O94898 1065 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 AHSGP02765 367 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 SLC35E2BP0CK96 405 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 XRCC1P18887 633 aaPredicted RBP16.73■□□□□ 0.27
LIG1-206ENST00000594067 HCAR3P49019 387 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 ATXN3P54252 364 aaPredicted RBP16.73■□□□□ 0.27
LIG1-206ENST00000594067 AIF1P55008 147 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 USP46P62068 366 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 MRPS22P82650 360 aaKnown RBP16.73■□□□□ 0.27
LIG1-206ENST00000594067 CYLC2Q14093 348 aaPredicted RBP16.73■□□□□ 0.27
LIG1-206ENST00000594067 GK3PQ14409 553 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 C16orf89Q6UX73 402 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 B3GNT6Q6ZMB0 384 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 ZNF467Q7Z7K2 595 aaPredicted RBP16.73■□□□□ 0.27
LIG1-206ENST00000594067 FAM35AQ86V20 835 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 TICAM1Q8IUC6 712 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 FSTL5Q8N475 847 aaPredicted RBP16.73■□□□□ 0.27
LIG1-206ENST00000594067 CNTD1Q8N815 330 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 ZFP28Q8NHY6 868 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 RHOJQ9H4E5 214 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 AP4B1Q9Y6B7 739 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 SBF1O95248 1867 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 MTSS1O43312 755 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 APOA4P06727 396 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 ENO3P13929 434 aaPredicted RBP16.73■□□□□ 0.27
LIG1-206ENST00000594067 MPP1Q00013 466 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 MYBPC1Q00872 1141 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 CTBP1Q13363 440 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 BNC2Q6ZN30 1099 aaPredicted RBP16.73■□□□□ 0.27
LIG1-206ENST00000594067 ARHGAP36Q6ZRI8 547 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 DENND6AQ8IWF6 608 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 PCED1BQ96HM7 432 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 CNDP1Q96KN2 507 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 SENP8Q96LD8 212 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 SERPINI1Q99574 410 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 TINF2Q9BSI4 451 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 RHOBTB2Q9BYZ6 727 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 Q9H521 79 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 LMCD1Q9NZU5 365 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 PRPF19Q9UMS4 504 aaKnown RBP16.73■□□□□ 0.27
LIG1-206ENST00000594067 ANKRD6Q9Y2G4 727 aa16.73■□□□□ 0.27
LIG1-206ENST00000594067 MRPL42Q9Y6G3 142 aaKnown RBP16.73■□□□□ 0.27
LIG1-206ENST00000594067 MBLAC1A4D2B0 266 aaPredicted RBP16.72■□□□□ 0.27
LIG1-206ENST00000594067 MEIS3P2A8K0S8 358 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 CABYRO75952 493 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 TMCC1O94876 653 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 CSRP3P50461 194 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 PRKAA1Q13131 559 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 ADGRE1Q14246 886 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 PRPSAP1Q14558 356 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 POU6F1Q14863 301 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 PCBP1Q15365 356 aaKnown RBP eCLIP16.72■□□□□ 0.27
LIG1-206ENST00000594067 TWF2Q6IBS0 349 aaKnown RBP16.72■□□□□ 0.27
LIG1-206ENST00000594067 NAPEPLDQ6IQ20 393 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 GPR142Q7Z601 462 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 CENPLQ8N0S6 344 aaPredicted RBP16.72■□□□□ 0.27
LIG1-206ENST00000594067 LSMEM2Q8N112 164 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 RP9Q8TA86 221 aaKnown RBP16.72■□□□□ 0.27
LIG1-206ENST00000594067 OMDQ99983 421 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 BRD8Q9H0E9 1235 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 ABHD16BQ9H3Z7 469 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 GALNT8Q9NY28 637 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 XPR1Q9UBH6 696 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 RIMS3Q9UJD0 308 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 CDYLQ9Y232 598 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 NUP205Q92621 2012 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 C9IYK1 514 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 STRNO43815 780 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 DLX3O60479 287 aa16.72■□□□□ 0.27
LIG1-206ENST00000594067 DDHD2O94830 711 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms