RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 ANP32AP39687 249 aaKnown RBP18.28■□□□□ 0.52
CIRBP-243ENST00000593128 TARDBPQ13148 414 aaKnown RBP eCLIP18.28■□□□□ 0.52
CIRBP-243ENST00000593128 ZNF542PQ5EBM4 170 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 CDKAL1Q5VV42 579 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 TMC6Q7Z403 805 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 BNIPLQ7Z465 357 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 PDZD3Q86UT5 571 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 CCDC185Q8N715 623 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 TMEM145Q8NBT3 493 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 ANKRD20A12PQ8NF67 263 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 NEK11Q8NG66 645 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 FAM172AQ8WUF8 416 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 NXPE2Q96DL1 559 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 MAGEB5Q9BZ81 275 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 LMBRD1Q9NUN5 540 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 NDFIP2Q9NV92 336 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 UCKL1Q9NWZ5 548 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 ADAM22Q9P0K1 906 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 HECAQ9UBI9 543 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-243ENST00000593128 PPARGC1AQ9UBK2 798 aaKnown RBP18.28■□□□□ 0.52
CIRBP-243ENST00000593128 ZNF212Q9UDV6 495 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 HPCAL4Q9UM19 191 aa18.28■□□□□ 0.52
CIRBP-243ENST00000593128 MYLKQ15746 1914 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 KRIT1O00522 736 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 TRIM38O00635 465 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 NEMP1O14524 444 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 ZNF821O75541 412 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-243ENST00000593128 KRT3P12035 628 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 ITGB7P26010 798 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 SEMG2Q02383 582 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 SLC20A2Q08357 652 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 SASS6Q6UVJ0 657 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 TRIM72Q6ZMU5 477 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 GCNT7Q6ZNI0 430 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 Q6ZSR6 202 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 KANSL1Q7Z3B3 1105 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 TSC1Q92574 1164 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 TBC1D31Q96DN5 1066 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 DNAJC28Q9NX36 388 aa18.27■□□□□ 0.52
CIRBP-243ENST00000593128 LAMA5O15230 3695 aa18.27■□□□□ 0.51
CIRBP-243ENST00000593128 C2CD4BA6NLJ0 364 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 A6NNZ2 444 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 FAM72CH0Y354 149 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 PAK4O96013 591 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-243ENST00000593128 PLEKP08567 350 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-243ENST00000593128 CDK4P11802 303 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 RHOQP17081 205 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 CDK11BP21127 795 aaKnown RBP18.26■□□□□ 0.51
CIRBP-243ENST00000593128 DGKAP23743 735 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 L1CAMP32004 1257 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 ETFBP38117 255 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 COPB1P53618 953 aaKnown RBP18.26■□□□□ 0.51
CIRBP-243ENST00000593128 JAM2P57087 298 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 RPS21P63220 83 aaKnown RBP18.26■□□□□ 0.51
CIRBP-243ENST00000593128 COL9A2Q14055 689 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-243ENST00000593128 POLD3Q15054 466 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-243ENST00000593128 ARTNQ5T4W7 220 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 FAM72AQ5TYM5 149 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 FAM72DQ6L9T8 149 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 SCYL2Q6P3W7 929 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 PARS2Q7L3T8 475 aaKnown RBP18.26■□□□□ 0.51
CIRBP-243ENST00000593128 ARCQ7LC44 396 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 FAM72BQ86X60 149 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 SLC25A45Q8N413 288 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 ARHGEF2Q92974 986 aaKnown RBP18.26■□□□□ 0.51
CIRBP-243ENST00000593128 FEM1CQ96JP0 617 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 PCDHB18PQ96TA0 734 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 SLC17A9Q9BYT1 436 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 KLHL11Q9NVR0 708 aa18.26■□□□□ 0.51
CIRBP-243ENST00000593128 IPO11Q9UI26 975 aaKnown RBP18.26■□□□□ 0.51
CIRBP-243ENST00000593128 ANKRD11Q6UB99 2663 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-243ENST00000593128 TRPM6Q9BX84 2022 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 RAMP2O60895 175 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 LRIG2O94898 1065 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 MYF5P13349 255 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 GPD1P21695 349 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 RFC1P35251 1148 aaPredicted RBP18.25■□□□□ 0.51
CIRBP-243ENST00000593128 MAPKAPK2P49137 400 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 UBXN1Q04323 297 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 SGCGQ13326 291 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 STRADAQ7RTN6 431 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 NETO2Q8NC67 525 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 OSBPL2Q9H1P3 480 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 DKK4Q9UBT3 224 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 ITM2BQ9Y287 266 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 SIK3Q9Y2K2 1263 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 FADS3Q9Y5Q0 445 aa18.25■□□□□ 0.51
CIRBP-243ENST00000593128 CELSR3Q9NYQ7 3312 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 IGLON5A6NGN9 336 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 RAD51BO15315 384 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 BUB1O43683 1085 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 UGT2B4P06133 528 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 ALPPL2P10696 532 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 PTPN9P43378 593 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 HDAC4P56524 1084 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 GEMIN4P57678 1058 aaKnown RBP18.24■□□□□ 0.51
CIRBP-243ENST00000593128 ZNF211Q13398 564 aaPredicted RBP18.24■□□□□ 0.51
CIRBP-243ENST00000593128 FGL2Q14314 439 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 CLEC16AQ2KHT3 1053 aa18.24■□□□□ 0.51
CIRBP-243ENST00000593128 PROX2Q3B8N5 592 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms